Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5867

Experiment: rubidium chloride 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rubidium chloride 0.25 M
6,685,784	+				+0.5
6,685,785	-				+1.6
6,685,785	-				+0.5
6,685,785	-				-0.7
6,685,826	+				+0.8
6,685,827	-				+1.0
6,685,910	+				+1.1
6,685,911	-				+1.4
6,685,930	-		Pf6N2E2_5866	0.12	+0.2
6,685,930	-		Pf6N2E2_5866	0.12	+0.9
6,685,950	+		Pf6N2E2_5866	0.15	+0.2
6,685,950	+		Pf6N2E2_5866	0.15	+0.5
6,685,951	-		Pf6N2E2_5866	0.15	+1.1
6,685,951	-		Pf6N2E2_5866	0.15	-1.5
6,685,951	-		Pf6N2E2_5866	0.15	+0.3
6,685,951	-		Pf6N2E2_5866	0.15	-0.2
6,686,076	+		Pf6N2E2_5866	0.31	-1.2
6,686,077	-		Pf6N2E2_5866	0.31	-0.3
6,686,077	-		Pf6N2E2_5866	0.31	+0.4
6,686,077	-		Pf6N2E2_5866	0.31	-0.5
6,686,077	-		Pf6N2E2_5866	0.31	+0.5
6,686,241	-		Pf6N2E2_5866	0.51	+0.4
6,686,241	-		Pf6N2E2_5866	0.51	+0.6
6,686,351	+		Pf6N2E2_5866	0.65	-2.7
6,686,556	+				-1.1
6,686,556	+				-0.2
6,686,556	+				-0.5
6,686,557	-				+1.3
6,686,557	-				+0.3
6,686,557	-				+1.4
6,686,557	-				+0.2
6,686,597	+				+0.1
6,686,597	+				+0.6
6,686,597	+				-0.2
6,686,597	+				-0.4
6,686,597	+				-0.4
6,686,754	+				+0.5
6,686,755	-				+0.9
6,686,960	+		Pf6N2E2_5867	0.23	-0.8
6,686,961	-		Pf6N2E2_5867	0.23	-0.2
6,686,961	-		Pf6N2E2_5867	0.23	+1.0
6,687,021	+		Pf6N2E2_5867	0.30	-0.4
6,687,021	+		Pf6N2E2_5867	0.30	-0.8
6,687,021	+		Pf6N2E2_5867	0.30	-0.8
6,687,022	-		Pf6N2E2_5867	0.30	-1.0
6,687,022	-		Pf6N2E2_5867	0.30	+0.3
6,687,022	-		Pf6N2E2_5867	0.30	-1.8
6,687,022	-		Pf6N2E2_5867	0.30	-0.7
6,687,022	-		Pf6N2E2_5867	0.30	-0.0
6,687,022	-		Pf6N2E2_5867	0.30	-2.1
6,687,210	+		Pf6N2E2_5867	0.51	+0.0
6,687,417	+		Pf6N2E2_5867	0.75	+0.3
6,687,417	+		Pf6N2E2_5867	0.75	+0.2
6,687,418	-		Pf6N2E2_5867	0.75	-0.1
6,687,418	-		Pf6N2E2_5867	0.75	+0.2
6,687,418	-		Pf6N2E2_5867	0.75	-0.3
6,687,677	+				+0.4
6,687,678	-				+0.5
6,687,710	+				+0.8
6,687,710	+				+1.2
6,687,710	+				-0.2
6,687,710	+				+0.6
6,687,711	-				+0.4
6,687,711	-				-0.5
6,687,711	-				-0.0
6,687,809	+				+0.4
6,687,810	-				-0.5
6,687,815	+				-0.4
6,687,815	+				+0.9
6,687,836	+				-0.2
6,687,836	+				-0.7
6,687,837	-				-0.2
6,687,837	-				-0.5
6,687,837	-				+0.3
6,687,977	+		Pf6N2E2_5868	0.23	-0.6
6,687,978	-		Pf6N2E2_5868	0.24	+1.2
6,688,002	-		Pf6N2E2_5868	0.26	+1.3
6,688,007	+		Pf6N2E2_5868	0.26	+0.1
6,688,008	-		Pf6N2E2_5868	0.27	+0.0
6,688,184	-		Pf6N2E2_5868	0.44	+1.0
6,688,259	+		Pf6N2E2_5868	0.51	-1.0
6,688,259	+		Pf6N2E2_5868	0.51	+0.3
6,688,260	-		Pf6N2E2_5868	0.51	-0.7
6,688,260	-		Pf6N2E2_5868	0.51	-0.8
6,688,260	-		Pf6N2E2_5868	0.51	-1.1
6,688,493	+		Pf6N2E2_5868	0.74	+0.2
6,688,493	+		Pf6N2E2_5868	0.74	-0.4
6,688,494	-		Pf6N2E2_5868	0.75	-0.2
6,688,494	-		Pf6N2E2_5868	0.75	+1.3
6,688,497	+		Pf6N2E2_5868	0.75	-0.8
6,688,497	+		Pf6N2E2_5868	0.75	-0.4
6,688,497	+		Pf6N2E2_5868	0.75	-1.7
6,688,497	+		Pf6N2E2_5868	0.75	-0.2
6,688,497	+		Pf6N2E2_5868	0.75	+0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.2
6,688,497	+		Pf6N2E2_5868	0.75	+0.8
6,688,497	+		Pf6N2E2_5868	0.75	+0.6
6,688,497	+		Pf6N2E2_5868	0.75	+0.8
6,688,497	+		Pf6N2E2_5868	0.75	+0.1
6,688,497	+		Pf6N2E2_5868	0.75	+0.4
6,688,497	+		Pf6N2E2_5868	0.75	-0.6
6,688,498	-		Pf6N2E2_5868	0.75	-2.2
6,688,498	-		Pf6N2E2_5868	0.75	+1.8
6,688,498	-		Pf6N2E2_5868	0.75	-0.4
6,688,498	-		Pf6N2E2_5868	0.75	-0.3
6,688,498	-		Pf6N2E2_5868	0.75	+0.4
6,688,498	-		Pf6N2E2_5868	0.75	+0.5
6,688,575	+		Pf6N2E2_5868	0.83	-1.7
6,688,576	-		Pf6N2E2_5868	0.83	+0.3
6,688,617	+		Pf6N2E2_5868	0.87	+0.0
6,688,618	-		Pf6N2E2_5868	0.87	+0.2
6,688,618	-		Pf6N2E2_5868	0.87	+0.0