Experiment: rubidium chloride 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_418 and Pf6N2E2_419 are separated by 39 nucleotides Pf6N2E2_419 and Pf6N2E2_420 are separated by 15 nucleotides Pf6N2E2_420 and Pf6N2E2_421 are separated by 11 nucleotides
Pf6N2E2_418 - Signal transduction histidine kinase CheA (EC 2.7.3.-), at 486,040 to 488,142
_418
Pf6N2E2_419 - STAS domain protein, at 488,182 to 488,466
_419
Pf6N2E2_420 - Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY, at 488,482 to 488,850
_420
Pf6N2E2_421 - Methyl-accepting chemotaxis protein, at 488,862 to 490,013
_421
Position (kb) 488
489 Strain fitness (log2 ratio) -1
0
1
2 at 487.520 kb on + strand, within Pf6N2E2_418 at 487.520 kb on + strand, within Pf6N2E2_418 at 487.521 kb on - strand, within Pf6N2E2_418 at 487.521 kb on - strand, within Pf6N2E2_418 at 487.521 kb on - strand, within Pf6N2E2_418 at 487.608 kb on - strand, within Pf6N2E2_418 at 487.754 kb on + strand, within Pf6N2E2_418 at 487.754 kb on + strand, within Pf6N2E2_418 at 488.148 kb on + strand at 488.149 kb on - strand at 488.170 kb on - strand at 488.170 kb on - strand at 488.170 kb on - strand at 488.278 kb on + strand, within Pf6N2E2_419 at 488.278 kb on + strand, within Pf6N2E2_419 at 488.278 kb on + strand, within Pf6N2E2_419 at 488.278 kb on + strand, within Pf6N2E2_419 at 488.279 kb on - strand, within Pf6N2E2_419 at 488.279 kb on - strand, within Pf6N2E2_419 at 488.279 kb on - strand, within Pf6N2E2_419 at 488.279 kb on - strand, within Pf6N2E2_419 at 488.400 kb on - strand, within Pf6N2E2_419 at 488.400 kb on - strand, within Pf6N2E2_419 at 488.454 kb on - strand at 488.631 kb on - strand, within Pf6N2E2_420 at 488.631 kb on - strand, within Pf6N2E2_420 at 488.836 kb on + strand at 488.837 kb on - strand at 488.864 kb on - strand at 488.864 kb on - strand at 488.941 kb on + strand at 488.941 kb on + strand at 488.941 kb on + strand at 488.941 kb on + strand at 488.941 kb on + strand at 488.942 kb on - strand at 489.496 kb on + strand, within Pf6N2E2_421 at 489.496 kb on + strand, within Pf6N2E2_421 at 489.496 kb on + strand, within Pf6N2E2_421 at 489.496 kb on + strand, within Pf6N2E2_421 at 489.497 kb on - strand, within Pf6N2E2_421 at 489.497 kb on - strand, within Pf6N2E2_421 at 489.514 kb on - strand, within Pf6N2E2_421 at 489.514 kb on - strand, within Pf6N2E2_421
Per-strain Table
Position Strand Gene LocusTag Fraction rubidium chloride 0.25 M remove 487,520 + Pf6N2E2_418 0.70 +0.6 487,520 + Pf6N2E2_418 0.70 -1.0 487,521 - Pf6N2E2_418 0.70 +0.5 487,521 - Pf6N2E2_418 0.70 +0.6 487,521 - Pf6N2E2_418 0.70 +0.2 487,608 - Pf6N2E2_418 0.75 -0.5 487,754 + Pf6N2E2_418 0.82 -0.8 487,754 + Pf6N2E2_418 0.82 -0.2 488,148 + +0.9 488,149 - -0.1 488,170 - -0.5 488,170 - +1.7 488,170 - -0.1 488,278 + Pf6N2E2_419 0.34 +0.3 488,278 + Pf6N2E2_419 0.34 -0.4 488,278 + Pf6N2E2_419 0.34 -1.1 488,278 + Pf6N2E2_419 0.34 -0.3 488,279 - Pf6N2E2_419 0.34 +0.5 488,279 - Pf6N2E2_419 0.34 -0.8 488,279 - Pf6N2E2_419 0.34 -1.6 488,279 - Pf6N2E2_419 0.34 +1.8 488,400 - Pf6N2E2_419 0.76 -0.9 488,400 - Pf6N2E2_419 0.76 -1.5 488,454 - +0.1 488,631 - Pf6N2E2_420 0.40 -0.3 488,631 - Pf6N2E2_420 0.40 -1.1 488,836 + -0.1 488,837 - +0.1 488,864 - -0.1 488,864 - -1.1 488,941 + -1.4 488,941 + +0.0 488,941 + +0.3 488,941 + +1.0 488,941 + +2.2 488,942 - +0.5 489,496 + Pf6N2E2_421 0.55 +0.1 489,496 + Pf6N2E2_421 0.55 +1.0 489,496 + Pf6N2E2_421 0.55 -1.4 489,496 + Pf6N2E2_421 0.55 +0.8 489,497 - Pf6N2E2_421 0.55 +0.5 489,497 - Pf6N2E2_421 0.55 +0.6 489,514 - Pf6N2E2_421 0.57 -0.2 489,514 - Pf6N2E2_421 0.57 +0.1
Or see this region's nucleotide sequence