Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2318

Experiment: rubidium chloride 0.25 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rubidium chloride 0.25 M
2,739,787	+		Pf6N2E2_2316	0.84	+0.2
2,739,787	+		Pf6N2E2_2316	0.84	-2.1
2,739,787	+		Pf6N2E2_2316	0.84	-0.2
2,739,788	-		Pf6N2E2_2316	0.84	-2.0
2,739,788	-		Pf6N2E2_2316	0.84	+0.2
2,739,788	-		Pf6N2E2_2316	0.84	+0.0
2,739,788	-		Pf6N2E2_2316	0.84	-0.8
2,739,788	-		Pf6N2E2_2316	0.84	-0.2
2,739,788	-		Pf6N2E2_2316	0.84	-0.6
2,739,791	+		Pf6N2E2_2316	0.84	-0.5
2,739,791	+		Pf6N2E2_2316	0.84	+0.2
2,739,791	+		Pf6N2E2_2316	0.84	+0.3
2,739,791	+		Pf6N2E2_2316	0.84	-1.1
2,739,791	+		Pf6N2E2_2316	0.84	-0.2
2,739,791	+		Pf6N2E2_2316	0.84	+3.0
2,739,791	+		Pf6N2E2_2316	0.84	+1.1
2,739,791	+		Pf6N2E2_2316	0.84	+1.0
2,739,791	+		Pf6N2E2_2316	0.84	+0.4
2,739,791	+		Pf6N2E2_2316	0.84	-1.0
2,739,792	-		Pf6N2E2_2316	0.84	-0.3
2,739,792	-		Pf6N2E2_2316	0.84	+0.5
2,739,792	-		Pf6N2E2_2316	0.84	-2.9
2,739,792	-		Pf6N2E2_2316	0.84	-0.2
2,739,792	-		Pf6N2E2_2316	0.84	+0.0
2,739,792	-		Pf6N2E2_2316	0.84	-1.2
2,739,792	-		Pf6N2E2_2316	0.84	-0.8
2,739,792	-		Pf6N2E2_2316	0.84	+1.0
2,739,869	+		Pf6N2E2_2316	0.90	-0.3
2,739,870	-		Pf6N2E2_2316	0.90	-0.7
2,739,870	-		Pf6N2E2_2316	0.90	-0.7
2,739,870	-		Pf6N2E2_2316	0.90	-1.5
2,739,870	-		Pf6N2E2_2316	0.90	-1.5
2,739,966	+				-0.2
2,739,966	+				-0.8
2,739,967	-				-1.5
2,739,967	-				-0.2
2,740,054	+				+0.5
2,740,054	+				+2.6
2,740,055	-				+1.3
2,740,055	-				-1.5
2,740,055	-				-1.7
2,740,168	+		Pf6N2E2_2317	0.27	+0.9
2,740,168	+		Pf6N2E2_2317	0.27	-0.8
2,740,168	+		Pf6N2E2_2317	0.27	-0.5
2,740,168	+		Pf6N2E2_2317	0.27	-0.7
2,740,169	-		Pf6N2E2_2317	0.27	-2.1
2,740,169	-		Pf6N2E2_2317	0.27	-1.0
2,740,171	+		Pf6N2E2_2317	0.27	+1.2
2,740,171	+		Pf6N2E2_2317	0.27	+1.3
2,740,172	-		Pf6N2E2_2317	0.27	-0.8
2,740,263	+		Pf6N2E2_2317	0.44	-1.2
2,740,561	+				+1.6
2,740,561	+				+0.4
2,740,561	+				+0.3
2,740,625	+				+0.9
2,740,625	+				-0.5
2,740,625	+				+0.4
2,740,764	+				-1.5
2,740,893	+				-1.8
2,740,896	+				+0.3
2,740,896	+				+0.0
2,740,897	-				-2.1
2,740,897	-				-0.4
2,740,968	+				+0.0
2,740,968	+				+0.6
2,740,968	+				-0.4
2,740,969	-				-1.0
2,740,969	-				-0.7
2,740,969	-				+1.6
2,740,969	-				-1.2
2,740,969	-				+1.0
2,741,086	+		Pf6N2E2_2318	0.14	-0.8
2,741,086	+		Pf6N2E2_2318	0.14	+0.0
2,741,087	-		Pf6N2E2_2318	0.14	-1.5
2,741,087	-		Pf6N2E2_2318	0.14	+0.6
2,741,146	+		Pf6N2E2_2318	0.16	-2.0
2,741,146	+		Pf6N2E2_2318	0.16	+1.2
2,741,147	-		Pf6N2E2_2318	0.16	-0.7
2,741,147	-		Pf6N2E2_2318	0.16	-0.2
2,741,147	-		Pf6N2E2_2318	0.16	-1.6
2,741,147	-		Pf6N2E2_2318	0.16	-3.0
2,741,424	+		Pf6N2E2_2318	0.28	-0.7
2,741,424	+				+1.6
2,741,424	+		Pf6N2E2_2318	0.28	-2.1
2,741,424	+		Pf6N2E2_2318	0.28	-0.7
2,741,424	+		Pf6N2E2_2318	0.28	-0.3
2,741,425	-		Pf6N2E2_2318	0.28	-2.5
2,741,425	-		Pf6N2E2_2318	0.28	-1.4
2,741,425	-		Pf6N2E2_2318	0.28	-2.5
2,741,425	-		Pf6N2E2_2318	0.28	-1.1
2,741,425	-		Pf6N2E2_2318	0.28	-1.1
2,741,425	-		Pf6N2E2_2318	0.28	-0.4
2,741,426	+		Pf6N2E2_2318	0.28	-1.0
2,741,520	+		Pf6N2E2_2318	0.32	-0.3
2,741,520	+		Pf6N2E2_2318	0.32	-0.5
2,741,520	+		Pf6N2E2_2318	0.32	-1.0
2,741,547	-		Pf6N2E2_2318	0.33	+0.8
2,741,566	-		Pf6N2E2_2318	0.34	-0.5
2,741,566	-		Pf6N2E2_2318	0.34	-1.4
2,741,578	+		Pf6N2E2_2318	0.34	-1.7
2,741,844	+		Pf6N2E2_2318	0.45	-1.0
2,742,392	+		Pf6N2E2_2318	0.67	-1.5
2,742,392	+		Pf6N2E2_2318	0.67	+0.0
2,743,020	+				-2.7
2,743,020	+				-0.6
2,743,020	+				-0.1
2,743,021	-				+1.6
2,743,021	-				-0.4
2,743,021	-				+1.6
2,743,021	-				-0.1
2,743,062	-				-0.4
2,743,334	+		Pf6N2E2_2319	0.53	-0.4
2,743,582	+		Pf6N2E2_2320	0.22	-0.7
2,743,582	+		Pf6N2E2_2320	0.22	+0.6
2,743,606	+		Pf6N2E2_2320	0.26	+0.0
2,743,607	-		Pf6N2E2_2320	0.26	-2.1
2,743,607	-		Pf6N2E2_2320	0.26	-1.5
2,743,717	+		Pf6N2E2_2320	0.42	-0.7
2,743,718	-		Pf6N2E2_2320	0.42	-0.1