Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08790

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,645,416	-		MMP_RS08775	0.69	+0.6
1,645,513	+				+0.3
1,645,556	-				+0.0
1,645,556	-				-0.0
1,645,559	+				+0.7
1,645,567	-				+0.2
1,645,740	-				-1.9
1,645,740	-				-2.0
1,645,804	+				-2.1
1,645,804	+				-1.8
1,645,838	-				-1.5
1,645,850	-				-2.7
1,645,851	+				-0.7
1,645,917	-				-1.2
1,645,919	-				-2.8
1,645,967	+				-2.7
1,645,980	+				-1.4
1,646,021	+				-2.3
1,646,072	-				-2.2
1,646,095	-				-2.9
1,646,175	-				-2.1
1,646,175	-				-1.6
1,646,231	-				-2.1
1,646,277	-		MMP_RS08785	0.26	+0.4
1,646,524	-		MMP_RS08790	0.15	-0.7
1,646,550	+		MMP_RS08790	0.19	-1.4
1,646,713	-		MMP_RS08790	0.39	-0.4
1,647,112	-		MMP_RS08790	0.89	-1.7
1,647,218	-				-1.1
1,647,219	+				-0.2
1,647,223	-				+0.3
1,647,224	+				-0.9
1,647,230	+				-1.3
1,647,240	-				+0.0
1,647,243	+				-1.0
1,647,250	+				-0.1
1,647,277	-				+0.3
1,647,278	+				-0.1
1,647,283	-				-0.7
1,647,304	+				+0.3
1,647,313	-				-0.7
1,647,319	+				+0.1
1,647,322	+				-0.3