Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07685

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,454,941	+		MMP_RS07675	0.80	-0.3
1,454,944	+		MMP_RS07675	0.80	-0.1
1,455,005	+		MMP_RS07675	0.85	+0.1
1,455,050	+		MMP_RS07675	0.88	-0.2
1,455,276	+				-0.2
1,455,344	+				+0.7
1,455,588	-		MMP_RS07680	0.46	+0.0
1,455,795	-		MMP_RS07680	0.81	+0.4
1,455,817	-		MMP_RS07680	0.84	+0.3
1,455,847	-		MMP_RS07680	0.89	+0.3
1,455,847	-		MMP_RS07680	0.89	+0.2
1,455,914	+				+0.5
1,455,914	+				-0.1
1,456,072	+		MMP_RS07685	0.15	+0.2
1,456,076	+		MMP_RS07685	0.15	-0.3
1,456,158	-		MMP_RS07685	0.23	-0.3
1,456,159	+		MMP_RS07685	0.24	-0.0
1,456,287	-		MMP_RS07685	0.36	+0.2
1,456,290	+		MMP_RS07685	0.37	-0.4
1,456,319	-		MMP_RS07685	0.40	+0.2
1,456,341	-		MMP_RS07685	0.42	-0.2
1,456,441	-		MMP_RS07685	0.52	-1.3
1,456,442	+		MMP_RS07685	0.52	-0.4
1,456,571	-		MMP_RS07685	0.65	-1.6
1,456,673	-		MMP_RS07685	0.75	+0.1
1,456,690	+		MMP_RS07685	0.77	-1.0
1,456,690	+		MMP_RS07685	0.77	-0.6
1,456,748	-		MMP_RS07685	0.82	-1.0
1,456,878	-				-0.5
1,456,878	-				-0.3
1,456,889	-				-0.7
1,456,892	-				-0.7
1,456,943	-				-0.5
1,456,953	+				+0.4
1,456,956	+				+0.5
1,456,959	-				-1.8
1,456,960	+				-0.4
1,456,979	+				+0.5
1,456,979	+				-0.1
1,456,980	-				-1.0
1,456,980	-				-1.1
1,456,981	+				-2.1
1,456,981	+				-1.5
1,457,014	+				-1.7
1,457,164	+				-1.9