Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07535

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,425,945	-		MMP_RS07525	0.61	-1.2
1,425,946	+		MMP_RS07525	0.61	-0.7
1,425,961	+		MMP_RS07525	0.62	-1.3
1,426,004	-		MMP_RS07525	0.66	-2.0
1,426,051	-		MMP_RS07525	0.70	-1.5
1,426,095	-		MMP_RS07525	0.74	-1.6
1,426,095	-		MMP_RS07525	0.74	-1.1
1,426,105	+		MMP_RS07525	0.74	-1.6
1,426,131	-		MMP_RS07525	0.77	-1.9
1,426,219	-		MMP_RS07525	0.84	-0.4
1,426,325	-				+0.1
1,426,325	-				-0.9
1,426,518	-		MMP_RS07530	0.24	-0.1
1,426,518	-		MMP_RS07530	0.24	-0.9
1,426,519	+		MMP_RS07530	0.24	-0.4
1,426,519	+		MMP_RS07530	0.24	-0.1
1,426,519	+		MMP_RS07530	0.24	-0.7
1,426,519	+		MMP_RS07530	0.24	+0.5
1,426,522	-		MMP_RS07530	0.25	-0.3
1,426,523	+		MMP_RS07530	0.25	-1.4
1,426,523	+		MMP_RS07530	0.25	-0.1
1,426,523	+		MMP_RS07530	0.25	-0.3
1,426,523	+		MMP_RS07530	0.25	-0.5
1,426,523	+		MMP_RS07530	0.25	-0.6
1,426,526	+		MMP_RS07530	0.26	+0.0
1,426,526	+		MMP_RS07530	0.26	-0.6
1,426,526	+		MMP_RS07530	0.26	-0.3
1,426,594	-		MMP_RS07530	0.40	-0.2
1,426,743	-		MMP_RS07530	0.71	-0.4
1,426,744	+		MMP_RS07530	0.71	-0.2
1,426,886	-				-0.8
1,426,947	-				-1.1
1,427,029	-		MMP_RS07535	0.16	-1.0
1,427,053	+		MMP_RS07535	0.19	-2.2
1,427,228	-		MMP_RS07535	0.42	-0.6
1,427,229	+		MMP_RS07535	0.43	-0.4
1,427,256	+		MMP_RS07535	0.46	-0.6
1,427,380	+		MMP_RS07535	0.62	+0.1
1,427,381	-		MMP_RS07535	0.63	-0.7
1,427,381	-		MMP_RS07535	0.63	-0.8
1,427,382	+		MMP_RS07535	0.63	-0.4
1,427,423	-		MMP_RS07535	0.68	-0.9
1,427,517	-		MMP_RS07535	0.81	-0.6
1,427,523	+		MMP_RS07535	0.81	-1.3
1,427,534	-		MMP_RS07535	0.83	+0.1
1,427,586	-		MMP_RS07535	0.90	-0.8
1,427,586	-		MMP_RS07535	0.90	+0.2
1,427,586	-		MMP_RS07535	0.90	+0.1
1,427,587	+		MMP_RS07535	0.90	-0.4
1,427,587	+		MMP_RS07535	0.90	-0.3
1,427,663	+				+0.3
1,427,762	+		MMP_RS07540	0.13	+0.7
1,427,898	+		MMP_RS07540	0.34	+0.1
1,427,940	-		MMP_RS07540	0.40	-0.3
1,427,953	-		MMP_RS07540	0.43	-0.0
1,427,968	+		MMP_RS07540	0.45	-0.2
1,428,202	+		MMP_RS07540	0.81	+0.3
1,428,358	-				-1.8
1,428,364	-				-2.1
1,428,483	+		MMP_RS07545	0.36	-0.8
1,428,566	-		MMP_RS07545	0.57	-1.9