Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06940

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,324,924	-		MMP_RS06930	0.54	-0.5
1,324,925	+		MMP_RS06930	0.54	-0.3
1,325,080	+		MMP_RS06930	0.74	-0.2
1,325,081	-		MMP_RS06930	0.74	-0.5
1,325,082	+		MMP_RS06930	0.74	+0.0
1,325,082	+		MMP_RS06930	0.74	-1.0
1,325,082	+		MMP_RS06930	0.74	-0.0
1,325,103	-		MMP_RS06930	0.77	-1.3
1,325,103	-		MMP_RS06930	0.77	-0.4
1,325,107	+		MMP_RS06930	0.77	+0.1
1,325,107	+		MMP_RS06930	0.77	-0.7
1,325,107	+		MMP_RS06930	0.77	-0.4
1,325,110	-		MMP_RS06930	0.78	-1.0
1,325,141	+		MMP_RS06930	0.81	-0.5
1,325,241	-				+0.0
1,325,490	+		MMP_RS06935	0.40	-0.2
1,325,540	-		MMP_RS06935	0.51	-0.6
1,325,540	-		MMP_RS06935	0.51	-0.0
1,325,541	+		MMP_RS06935	0.51	-0.3
1,325,541	+		MMP_RS06935	0.51	-0.4
1,325,541	+		MMP_RS06935	0.51	-0.5
1,325,632	-		MMP_RS06935	0.70	+0.6
1,325,632	-		MMP_RS06935	0.70	+0.5
1,325,668	-		MMP_RS06935	0.77	+0.6
1,325,692	+		MMP_RS06935	0.82	-0.3
1,325,760	-				-0.0
1,325,768	-				+0.4
1,325,859	-				+0.2
1,325,859	-				-0.2
1,325,860	+		MMP_RS06940	0.10	-1.2
1,325,860	+		MMP_RS06940	0.10	+0.2
1,325,877	+		MMP_RS06940	0.12	-0.9
1,325,917	-		MMP_RS06940	0.17	-0.2
1,326,284	-		MMP_RS06940	0.63	-0.7
1,326,285	+		MMP_RS06940	0.64	-1.1
1,326,334	-		MMP_RS06940	0.70	-1.9
1,326,337	-		MMP_RS06940	0.70	-1.7
1,326,370	-		MMP_RS06940	0.74	-0.4
1,326,657	+				-0.7
1,326,660	-				-1.7
1,326,663	+				+0.2
1,326,734	-				-1.7
1,326,742	+				-1.2
1,326,774	-				-1.6
1,326,797	+				-1.2
1,326,797	+				-1.7
1,326,807	-				-1.2
1,326,999	-				-2.0
1,326,999	-				-2.7
1,327,023	-				-1.8
1,327,104	+				-1.4
1,327,318	-				-1.7
1,327,318	-				-1.4
1,327,319	+				-2.1
1,327,334	-				-0.1
1,327,346	+				+0.6
1,327,374	+				-0.5
1,327,376	-				-0.1
1,327,384	-				+0.1
1,327,384	-				-0.0
1,327,384	-				+0.2
1,327,384	-				-0.5
1,327,385	+				-0.9
1,327,385	+				+0.6
1,327,386	-				+0.2
1,327,387	+				+0.1
1,327,404	-				-0.3
1,327,405	+				+0.2
1,327,419	-				-0.2
1,327,422	-				-0.3