Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06700

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,285,669	+				-2.7
1,285,697	-				-2.7
1,285,698	+				-2.2
1,285,702	+				-2.9
1,285,824	-				-3.1
1,285,863	+				-2.8
1,285,871	+				-2.3
1,285,894	-				-2.4
1,285,952	+				-2.3
1,285,955	-				-1.7
1,285,955	-				-1.9
1,285,976	+				-2.4
1,285,988	-				-3.4
1,286,009	-				-2.0
1,286,010	+				-4.2
1,286,011	-				-3.1
1,286,011	-				-2.0
1,286,011	-				-1.6
1,286,012	+				-3.3
1,286,012	+				-2.6
1,286,015	-				-2.2
1,286,015	-				-2.9
1,286,016	+				-2.6
1,286,016	+				-3.0
1,286,019	-				-1.8
1,286,019	-				-2.7
1,286,019	-				-2.1
1,286,021	-				-2.5
1,286,025	+				-1.7
1,286,029	-				-1.6
1,286,063	+				-2.3
1,286,080	+				-3.0
1,286,090	-				-2.3
1,286,178	+				-2.1
1,286,186	-				-2.2
1,286,603	+				-1.8
1,286,725	-		MMP_RS06700	0.20	-3.5
1,286,726	+		MMP_RS06700	0.20	-3.0
1,286,726	+		MMP_RS06700	0.20	-2.7
1,286,831	-		MMP_RS06700	0.40	-3.8
1,286,831	-		MMP_RS06700	0.40	-3.5
1,286,832	+		MMP_RS06700	0.40	-4.2
1,286,833	-		MMP_RS06700	0.40	-3.6
1,286,836	-		MMP_RS06700	0.40	-2.8
1,286,899	-		MMP_RS06700	0.52	-3.1
1,286,901	-		MMP_RS06700	0.53	-3.3
1,286,902	+		MMP_RS06700	0.53	-5.6
1,286,902	+		MMP_RS06700	0.53	-3.3
1,286,923	-		MMP_RS06700	0.57	-3.8
1,286,923	-		MMP_RS06700	0.57	-4.8
1,286,923	-		MMP_RS06700	0.57	-4.2
1,286,923	-		MMP_RS06700	0.57	-3.9
1,286,923	-		MMP_RS06700	0.57	-3.6
1,286,924	+		MMP_RS06700	0.57	-2.5
1,286,993	+		MMP_RS06700	0.70	-3.5
1,286,998	-		MMP_RS06700	0.71	-3.4
1,287,019	-		MMP_RS06700	0.75	-4.0
1,287,022	-		MMP_RS06700	0.75	-3.5
1,287,023	+		MMP_RS06700	0.75	-4.4
1,287,048	+		MMP_RS06700	0.80	-3.1
1,287,048	+		MMP_RS06700	0.80	-3.2
1,287,146	+				-2.6
1,287,156	-				-3.0
1,287,236	-				-2.1
1,287,425	+		MMP_RS06705	0.28	-1.8
1,287,446	-		MMP_RS06705	0.31	-2.3
1,287,447	+		MMP_RS06705	0.31	-3.3
1,287,529	+		MMP_RS06705	0.41	-2.0
1,287,645	-		MMP_RS06705	0.55	-1.0
1,287,751	-		MMP_RS06705	0.68	-1.1
1,287,829	-		MMP_RS06705	0.77	-2.0
1,287,904	+		MMP_RS06705	0.86	-1.2
1,287,904	+		MMP_RS06705	0.86	-1.5
1,288,019	+				-1.3
1,288,022	+				-2.6
1,288,067	+				-1.2
1,288,070	-				-1.8
1,288,070	-				-1.9
1,288,071	+				-1.8
1,288,071	+				-1.8
1,288,074	-				-2.0
1,288,075	+				-1.6
1,288,075	+				-1.8
1,288,075	+				-1.3
1,288,077	-				-0.9
1,288,078	+				-1.3
1,288,078	+				-2.3
1,288,079	-				-1.5
1,288,080	+				-1.4
1,288,080	+				-0.6
1,288,080	+				-1.6
1,288,081	-				-1.8
1,288,081	-				-1.4
1,288,082	+				-2.5
1,288,082	+				-1.1
1,288,082	+				-1.4
1,288,082	+				-1.8
1,288,084	-				-1.0
1,288,110	-				+0.4
1,288,121	-				+0.5
1,288,129	-				+0.2