Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04710

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
900,074	+				-1.7
900,265	-				-2.0
900,298	-				-2.2
900,299	+				-0.7
900,299	+				-1.4
900,299	+				+0.1
900,299	+				-0.7
900,299	+				-2.0
900,299	+				-1.6
900,323	+				-0.9
900,464	-				-0.6
900,465	+				-1.3
900,501	-				-2.0
900,913	-				-1.4
900,914	+				-1.6
900,914	+				-3.8
900,914	+				-0.7
900,916	+				-1.9
900,939	-				-1.2
900,940	+				-1.0
901,094	-		MMP_RS04710	0.41	-1.1
901,169	-		MMP_RS04710	0.60	-0.5
901,272	+		MMP_RS04710	0.86	-0.3
901,286	-				-0.4
901,304	-				-1.5
901,307	-				-0.3
901,308	+				+0.5
901,308	+				-0.8
901,308	+				+1.7
901,308	+				-0.7
901,341	-				-1.4
901,360	-				-1.3
901,362	-				-0.5
901,362	-				-1.7
901,362	-				-0.6
901,363	+				-0.6
901,363	+				-0.8
901,363	+				-0.5
901,365	+				-0.2
901,365	+				+0.4
901,365	+				-2.0
901,383	-				-2.0
901,393	-				-0.4
901,402	+				-0.7
901,403	-				+0.1
901,403	-				-0.6
901,403	-				-0.7
901,404	+				-0.3
901,404	+				-3.4
901,404	+				-0.8
901,407	-				-0.7
901,407	-				-0.1
901,408	+				-1.2
901,423	+				-0.9
901,453	-				-0.4
901,470	-				-0.7
901,470	-				-1.8
901,474	-				-1.0
901,474	-				-0.1
901,475	+				-0.3
901,476	-				-2.2
901,476	-				-1.0
901,477	+				-0.8
901,477	+				-1.3
901,478	-				-0.9
901,478	-				+0.1
901,479	+				-0.2
901,479	+				-0.3
901,481	-				-0.5
901,511	+				-0.4
901,582	-		MMP_RS04715	0.19	+2.0
901,583	+		MMP_RS04715	0.19	+0.0
901,583	+		MMP_RS04715	0.19	-0.7
901,598	+		MMP_RS04715	0.23	-0.2
901,620	-		MMP_RS04715	0.29	+0.3
901,626	-		MMP_RS04715	0.30	-0.1
901,627	+		MMP_RS04715	0.30	-0.4
901,636	-		MMP_RS04715	0.33	+0.2
901,648	-		MMP_RS04715	0.36	+0.5
901,649	+		MMP_RS04715	0.36	+0.1
901,650	-		MMP_RS04715	0.36	+0.3
901,702	+		MMP_RS04715	0.50	-0.3
901,710	-		MMP_RS04715	0.52	+0.1
901,710	-		MMP_RS04715	0.52	-0.2
901,729	-		MMP_RS04715	0.57	-0.0
901,729	-		MMP_RS04715	0.57	+0.9
901,740	-		MMP_RS04715	0.60	+0.5
901,750	+		MMP_RS04715	0.63	+0.2
901,931	+				-0.4
902,011	+		MMP_RS04720	0.22	+1.5
902,012	-		MMP_RS04720	0.22	+0.1
902,016	-		MMP_RS04720	0.23	+1.1
902,017	+		MMP_RS04720	0.23	-0.6
902,017	+		MMP_RS04720	0.23	-0.3