Strain Fitness in Methanococcus maripaludis S2 around MMP_RS02190
Experiment: Formate McCas no stress control 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate McCas no stress control 2 |
---|---|---|---|---|---|
remove | |||||
408,887 | - | -4.3 | |||
409,043 | + | -2.0 | |||
409,045 | + | -1.1 | |||
409,088 | + | -0.8 | |||
409,769 | + | -0.4 | |||
409,798 | - | -2.2 | |||
409,798 | - | -1.9 | |||
409,903 | - | -1.8 | |||
409,930 | + | MMP_RS02190 | 0.12 | -1.1 | |
410,106 | - | MMP_RS02190 | 0.47 | -1.7 | |
410,274 | + | MMP_RS02190 | 0.81 | -0.1 | |
410,349 | + | -0.5 | |||
410,371 | + | -0.5 | |||
410,527 | + | -0.4 | |||
410,622 | - | MMP_RS02195 | 0.17 | -0.9 | |
410,845 | - | MMP_RS02195 | 0.34 | -2.8 | |
410,872 | - | MMP_RS02195 | 0.37 | -2.0 | |
410,884 | + | MMP_RS02195 | 0.37 | -0.8 | |
411,366 | - | MMP_RS02195 | 0.75 | -2.3 |
Or see this region's nucleotide sequence