Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01005

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
189,906	-				-0.5
190,090	+				-0.4
190,542	-				+0.1
190,547	-				+0.0
190,549	-				-0.5
190,579	-				+0.1
190,589	+				-0.4
190,627	+				+0.0
190,729	-		MMP_RS01005	0.19	-2.1
190,730	+		MMP_RS01005	0.19	-2.5
191,097	-				-2.3
191,144	-				-1.2
191,151	-				-0.4
191,152	+				-2.5
191,186	-				+0.1
191,191	-				+0.6
191,273	-				+0.5
191,273	-				-0.3
191,274	+				-0.2
191,280	-				-0.1
191,281	+				+0.1
191,303	+		MMP_RS01010	0.12	+0.2
191,309	-		MMP_RS01010	0.13	-0.2
191,396	-		MMP_RS01010	0.29	-0.1
191,397	+		MMP_RS01010	0.29	-0.2
191,397	+		MMP_RS01010	0.29	-0.5
191,442	+		MMP_RS01010	0.38	-0.1
191,478	+		MMP_RS01010	0.45	+0.9
191,519	+		MMP_RS01010	0.52	+0.3
191,522	-		MMP_RS01010	0.53	-0.3
191,523	+		MMP_RS01010	0.53	+0.2
191,572	-		MMP_RS01010	0.62	+0.4
191,572	-		MMP_RS01010	0.62	-0.2
191,715	+		MMP_RS01010	0.89	+0.3
191,740	-				-0.0
191,750	-				-0.0
191,750	-				+0.1
191,753	-				-0.6
191,754	+				+0.2
191,754	+				-0.9
191,754	+				-0.3
191,755	-				+0.3
191,756	+				+0.2
191,779	-				+0.0
191,780	+				+0.1
191,781	-				+0.3
191,795	-				-0.0
191,795	-				-0.3
191,795	-				+0.3
191,801	+				-0.2
191,801	+				+0.1
191,841	+				+0.6
191,852	+				-0.0
191,854	-				+0.6
191,855	+				+0.0
191,871	+				+0.2
191,874	-				+0.1
191,875	+				-0.3
191,912	-				+0.1
191,993	-				+0.1
191,994	+				+0.1