Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00620

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
112,751	-				+0.2
112,752	+				-0.2
112,777	-				+0.3
112,798	-				+0.4
112,798	-				+0.1
112,799	+				+0.1
112,799	+				-0.4
112,809	-				+0.0
113,770	-				-0.9
113,806	-				-0.1
113,886	-		MMP_RS00620	0.22	-0.8
113,911	+		MMP_RS00620	0.27	-0.7
113,953	+		MMP_RS00620	0.33	-0.7
113,986	+		MMP_RS00620	0.39	-0.7
114,042	-		MMP_RS00620	0.48	-0.3
114,043	+		MMP_RS00620	0.48	-0.3
114,055	+		MMP_RS00620	0.50	-0.0
114,122	+		MMP_RS00620	0.61	-1.9
114,122	+		MMP_RS00620	0.61	+0.2
114,142	-		MMP_RS00620	0.64	-0.6
114,229	-		MMP_RS00620	0.78	-0.9
114,261	-		MMP_RS00620	0.83	-0.6
114,304	+				-0.1
114,346	+				+0.3
114,402	-				-0.1
114,403	+				+0.5
114,405	+				+0.2
114,406	-				-0.3
114,407	+				-0.2
114,409	-				+0.2
114,486	+				+0.4
114,493	+				-0.5
114,503	-				+0.1
114,520	-		MMP_RS00625	0.12	+0.0
114,525	+		MMP_RS00625	0.13	+0.1
114,533	-		MMP_RS00625	0.14	+0.2
114,534	+		MMP_RS00625	0.14	-0.3
114,535	-		MMP_RS00625	0.14	+0.2
114,536	+		MMP_RS00625	0.15	-0.1
114,808	-		MMP_RS00625	0.63	-0.3
114,880	+		MMP_RS00625	0.76	+0.1
114,963	+				+0.1
114,963	+				+0.8
114,964	-				-0.0
114,965	+				+0.5
114,965	+				-0.1
115,069	+				-0.4
115,073	+				-0.1
115,073	+				-0.2
115,135	-				-0.2
115,135	-				+0.4
115,136	+				+0.1
115,326	-		MMP_RS00630	0.37	+0.0
115,344	+		MMP_RS00630	0.40	-0.0