Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00290

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
64,570	-		MMP_RS00285	0.16	-0.0
64,632	+		MMP_RS00285	0.22	-0.0
64,722	-		MMP_RS00285	0.30	+0.2
64,766	-		MMP_RS00285	0.34	+0.8
64,766	-		MMP_RS00285	0.34	+0.1
64,777	-		MMP_RS00285	0.35	-0.0
64,788	-		MMP_RS00285	0.36	+0.8
64,824	-		MMP_RS00285	0.39	+0.3
65,009	-		MMP_RS00285	0.56	-0.2
65,009	-		MMP_RS00285	0.56	-0.2
65,293	+		MMP_RS00285	0.81	-0.1
65,371	+		MMP_RS00285	0.88	-0.4
65,373	-		MMP_RS00285	0.89	+0.5
65,437	+				+0.6
65,464	-				+0.0
65,464	-				+0.6
65,465	+				-0.8
65,498	-				+0.1
65,499	+				+0.3
65,508	-				-0.8
65,521	-				-1.2
65,522	+				-0.3
65,522	+				-0.1
65,522	+				-0.6
65,523	-				+0.1
65,575	-				-1.1
65,575	-				-1.4
65,575	-				-0.3
65,575	-				-1.2
65,575	-				-1.0
65,577	-				-0.3
65,577	-				-0.7
65,578	+				-0.9
65,578	+				-1.0
65,578	+				-1.1
65,587	-		MMP_RS00290	0.11	-1.4
65,587	-		MMP_RS00290	0.11	-1.3
65,619	-		MMP_RS00290	0.23	-0.1
65,625	-		MMP_RS00290	0.25	-0.7
65,664	-		MMP_RS00290	0.40	-1.3
65,755	-		MMP_RS00290	0.73	-1.2
65,773	-		MMP_RS00290	0.79	-0.6
65,854	-				-1.9
65,855	+				-1.8
65,864	+				-1.8
65,865	-				-1.4
65,866	+				-2.2
65,946	-		MMP_RS00295	0.17	-1.6
66,252	-		MMP_RS00295	0.84	-1.1
66,320	-				-1.7
66,320	-				-3.4
66,713	+		MMP_RS00300	0.83	-0.7