Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS16325

Experiment: Adenosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS16320 and BWI76_RS16325 are separated by 272 nucleotidesBWI76_RS16325 and BWI76_RS16330 are separated by 56 nucleotides BWI76_RS16320: BWI76_RS16320 - methionine ABC transporter substrate-binding protein, at 3,387,584 to 3,388,396 _RS16320 BWI76_RS16325: BWI76_RS16325 - adenosine deaminase, at 3,388,669 to 3,389,670 _RS16325 BWI76_RS16330: BWI76_RS16330 - oxidoreductase, at 3,389,727 to 3,390,767 _RS16330 Position (kb) 3388 3389 3390Strain fitness (log2 ratio) -2 -1 0 1 2at 3388.085 kb on - strand, within BWI76_RS16320at 3388.101 kb on - strand, within BWI76_RS16320at 3388.101 kb on - strandat 3388.136 kb on + strand, within BWI76_RS16320at 3388.187 kb on - strand, within BWI76_RS16320at 3388.187 kb on - strand, within BWI76_RS16320at 3388.187 kb on - strand, within BWI76_RS16320at 3388.219 kb on + strand, within BWI76_RS16320at 3388.314 kb on - strand, within BWI76_RS16320at 3388.500 kb on + strandat 3388.539 kb on + strandat 3388.577 kb on + strandat 3388.585 kb on - strandat 3388.585 kb on - strandat 3388.585 kb on - strandat 3388.629 kb on - strandat 3388.637 kb on - strandat 3388.700 kb on + strandat 3388.813 kb on - strand, within BWI76_RS16325at 3388.852 kb on + strand, within BWI76_RS16325at 3388.873 kb on - strand, within BWI76_RS16325at 3388.944 kb on + strand, within BWI76_RS16325at 3389.252 kb on - strand, within BWI76_RS16325at 3389.421 kb on + strand, within BWI76_RS16325at 3389.725 kb on + strandat 3390.090 kb on + strand, within BWI76_RS16330at 3390.199 kb on - strand, within BWI76_RS16330at 3390.437 kb on - strand, within BWI76_RS16330at 3390.553 kb on - strand, within BWI76_RS16330

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (C)
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3,388,085 - BWI76_RS16320 0.62 +0.3
3,388,101 - BWI76_RS16320 0.64 -0.4
3,388,101 - +0.4
3,388,136 + BWI76_RS16320 0.68 +0.0
3,388,187 - BWI76_RS16320 0.74 -0.9
3,388,187 - BWI76_RS16320 0.74 -0.1
3,388,187 - BWI76_RS16320 0.74 -0.8
3,388,219 + BWI76_RS16320 0.78 +1.8
3,388,314 - BWI76_RS16320 0.90 +0.6
3,388,500 + +1.1
3,388,539 + -2.3
3,388,577 + -0.3
3,388,585 - +1.0
3,388,585 - +0.4
3,388,585 - +1.2
3,388,629 - -0.8
3,388,637 - +0.6
3,388,700 + -1.1
3,388,813 - BWI76_RS16325 0.14 -0.4
3,388,852 + BWI76_RS16325 0.18 -1.6
3,388,873 - BWI76_RS16325 0.20 -0.9
3,388,944 + BWI76_RS16325 0.27 +2.4
3,389,252 - BWI76_RS16325 0.58 -0.5
3,389,421 + BWI76_RS16325 0.75 -1.3
3,389,725 + -0.4
3,390,090 + BWI76_RS16330 0.35 +0.4
3,390,199 - BWI76_RS16330 0.45 +0.1
3,390,437 - BWI76_RS16330 0.68 +0.3
3,390,553 - BWI76_RS16330 0.79 -0.2

Or see this region's nucleotide sequence