Experiment: Adenosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS11450 and BWI76_RS11455 are separated by 100 nucleotides BWI76_RS11455 and BWI76_RS11460 overlap by 17 nucleotides BWI76_RS11460 and BWI76_RS11465 are separated by 152 nucleotides BWI76_RS11465 and BWI76_RS11470 are separated by 27 nucleotides
BWI76_RS11450: BWI76_RS11450 - cyanate MFS transporter, at 2,409,682 to 2,410,866
_RS11450
BWI76_RS11455: BWI76_RS11455 - AraC family transcriptional regulator, at 2,410,967 to 2,411,758
_RS11455
BWI76_RS11460: BWI76_RS11460 - DUF441 family protein, at 2,411,742 to 2,412,188
_RS11460
BWI76_RS11465: BWI76_RS11465 - hypothetical protein, at 2,412,341 to 2,412,841
_RS11465
BWI76_RS11470: BWI76_RS11470 - sensor domain-containing diguanylate cyclase, at 2,412,869 to 2,414,371
_RS11470
Position (kb)
2411
2412
2413 Strain fitness (log2 ratio)
-1
0
1 at 2410.837 kb on + strand at 2411.331 kb on + strand, within BWI76_RS11455 at 2411.569 kb on - strand, within BWI76_RS11455 at 2411.656 kb on - strand, within BWI76_RS11455 at 2411.861 kb on + strand, within BWI76_RS11460 at 2412.074 kb on + strand, within BWI76_RS11460 at 2412.164 kb on - strand at 2412.181 kb on - strand at 2412.197 kb on - strand at 2412.197 kb on - strand at 2412.367 kb on + strand at 2412.558 kb on + strand, within BWI76_RS11465 at 2412.680 kb on + strand, within BWI76_RS11465 at 2412.696 kb on + strand, within BWI76_RS11465 at 2412.773 kb on - strand, within BWI76_RS11465 at 2412.980 kb on + strand at 2413.026 kb on + strand, within BWI76_RS11470 at 2413.041 kb on - strand, within BWI76_RS11470 at 2413.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (C) remove 2,410,837 + +0.7 2,411,331 + BWI76_RS11455 0.46 -0.0 2,411,569 - BWI76_RS11455 0.76 -0.3 2,411,656 - BWI76_RS11455 0.87 -1.2 2,411,861 + BWI76_RS11460 0.27 -1.3 2,412,074 + BWI76_RS11460 0.74 -0.4 2,412,164 - +0.0 2,412,181 - +0.1 2,412,197 - +0.3 2,412,197 - +0.5 2,412,367 + -1.1 2,412,558 + BWI76_RS11465 0.43 -0.3 2,412,680 + BWI76_RS11465 0.68 -0.3 2,412,696 + BWI76_RS11465 0.71 +1.0 2,412,773 - BWI76_RS11465 0.86 +0.7 2,412,980 + +0.6 2,413,026 + BWI76_RS11470 0.10 +0.1 2,413,041 - BWI76_RS11470 0.11 -0.1 2,413,125 - +0.4
Or see this region's nucleotide sequence