Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS09390

Experiment: Adenosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS09385 and BWI76_RS09390 overlap by 4 nucleotidesBWI76_RS09390 and BWI76_RS09395 overlap by 4 nucleotides BWI76_RS09385: BWI76_RS09385 - phage tail tape measure protein, at 1,967,664 to 1,970,291 _RS09385 BWI76_RS09390: BWI76_RS09390 - phage tail protein, at 1,970,288 to 1,970,773 _RS09390 BWI76_RS09395: BWI76_RS09395 - late control gene D protein, at 1,970,770 to 1,971,855 _RS09395 Position (kb) 1970 1971Strain fitness (log2 ratio) -1 0 1 2 3at 1969.478 kb on - strand, within BWI76_RS09385at 1969.623 kb on - strand, within BWI76_RS09385at 1969.623 kb on - strand, within BWI76_RS09385at 1969.717 kb on - strand, within BWI76_RS09385at 1970.375 kb on + strand, within BWI76_RS09390at 1970.560 kb on - strand, within BWI76_RS09390at 1970.642 kb on + strand, within BWI76_RS09390at 1970.698 kb on + strand, within BWI76_RS09390at 1970.770 kb on - strandat 1970.812 kb on + strandat 1971.182 kb on + strand, within BWI76_RS09395at 1971.190 kb on - strand, within BWI76_RS09395at 1971.309 kb on + strand, within BWI76_RS09395at 1971.311 kb on + strand, within BWI76_RS09395at 1971.574 kb on - strand, within BWI76_RS09395at 1971.617 kb on - strandat 1971.657 kb on + strand, within BWI76_RS09395at 1971.684 kb on + strand, within BWI76_RS09395at 1971.713 kb on - strand, within BWI76_RS09395at 1971.745 kb on - strand, within BWI76_RS09395at 1971.755 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (C)
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1,969,478 - BWI76_RS09385 0.69 -0.0
1,969,623 - BWI76_RS09385 0.75 -0.1
1,969,623 - BWI76_RS09385 0.75 +0.1
1,969,717 - BWI76_RS09385 0.78 +0.2
1,970,375 + BWI76_RS09390 0.18 -0.6
1,970,560 - BWI76_RS09390 0.56 -1.2
1,970,642 + BWI76_RS09390 0.73 -0.8
1,970,698 + BWI76_RS09390 0.84 -1.5
1,970,770 - -0.5
1,970,812 + +0.5
1,971,182 + BWI76_RS09395 0.38 +0.8
1,971,190 - BWI76_RS09395 0.39 +2.4
1,971,309 + BWI76_RS09395 0.50 +0.3
1,971,311 + BWI76_RS09395 0.50 +0.5
1,971,574 - BWI76_RS09395 0.74 +0.6
1,971,617 - +3.0
1,971,657 + BWI76_RS09395 0.82 -0.7
1,971,684 + BWI76_RS09395 0.84 +0.4
1,971,713 - BWI76_RS09395 0.87 +0.3
1,971,745 - BWI76_RS09395 0.90 +0.3
1,971,755 - +1.7

Or see this region's nucleotide sequence