Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_24805
Experiment: Cephalothin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
5,609,069 | + | -0.3 | |||
5,609,221 | + | +0.1 | |||
5,609,523 | + | -0.4 | |||
5,609,523 | + | -0.2 | |||
5,609,623 | + | +0.2 | |||
5,609,623 | + | +0.1 | |||
5,609,623 | + | +0.2 | |||
5,609,624 | - | -0.2 | |||
5,609,628 | - | +0.6 | |||
5,609,628 | - | +0.2 | |||
5,609,628 | - | -0.5 | |||
5,609,628 | - | -0.3 | |||
5,609,628 | - | -2.2 | |||
5,609,659 | + | -0.0 | |||
5,609,746 | + | -0.4 | |||
5,609,746 | + | -0.1 | |||
5,609,747 | - | +0.2 | |||
5,609,804 | + | AO356_24805 | 0.13 | -0.9 | |
5,609,804 | + | AO356_24805 | 0.13 | +0.2 | |
5,609,805 | - | AO356_24805 | 0.13 | +0.6 | |
5,609,855 | + | AO356_24805 | 0.17 | -0.5 | |
5,609,946 | - | AO356_24805 | 0.25 | +0.5 | |
5,609,946 | - | AO356_24805 | 0.25 | +0.2 | |
5,609,946 | - | AO356_24805 | 0.25 | +1.3 | |
5,609,946 | - | AO356_24805 | 0.25 | +0.9 | |
5,609,946 | - | AO356_24805 | 0.25 | +0.2 | |
5,610,341 | + | AO356_24805 | 0.59 | +0.2 | |
5,610,342 | - | AO356_24805 | 0.59 | -0.5 | |
5,610,342 | - | AO356_24805 | 0.59 | -0.6 | |
5,610,554 | + | AO356_24805 | 0.77 | +0.3 | |
5,610,968 | - | +0.6 | |||
5,610,968 | - | -1.0 | |||
5,610,968 | - | +0.2 | |||
5,611,035 | - | +0.5 | |||
5,611,035 | - | +0.8 | |||
5,611,035 | - | +1.0 | |||
5,611,797 | + | +0.1 | |||
5,611,797 | + | -1.1 | |||
5,611,798 | - | +1.1 | |||
5,611,798 | - | +0.1 |
Or see this region's nucleotide sequence