Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22120

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
4,950,641	+		AO356_22115	0.11	+0.6
4,950,641	+		AO356_22115	0.11	+0.1
4,950,642	-		AO356_22115	0.11	+1.0
4,950,642	-		AO356_22115	0.11	-0.2
4,950,750	-		AO356_22115	0.35	+0.4
4,950,797	+		AO356_22115	0.46	-0.6
4,950,797	+		AO356_22115	0.46	+0.7
4,950,797	+		AO356_22115	0.46	-1.0
4,950,797	+		AO356_22115	0.46	+0.1
4,950,797	+		AO356_22115	0.46	+0.4
4,950,797	+		AO356_22115	0.46	+0.7
4,950,798	-		AO356_22115	0.46	-0.6
4,950,798	-		AO356_22115	0.46	+0.9
4,950,798	-		AO356_22115	0.46	+0.3
4,950,798	-		AO356_22115	0.46	+0.6
4,950,824	+		AO356_22115	0.52	+0.5
4,950,825	-		AO356_22115	0.52	+1.0
4,950,825	-		AO356_22115	0.52	+0.7
4,950,825	-		AO356_22115	0.52	+1.2
4,950,825	-		AO356_22115	0.52	-0.3
4,950,830	+		AO356_22115	0.53	-0.7
4,950,830	+		AO356_22115	0.53	-0.2
4,950,830	+		AO356_22115	0.53	-0.2
4,950,830	+		AO356_22115	0.53	+0.3
4,950,830	+		AO356_22115	0.53	+0.5
4,950,831	-		AO356_22115	0.53	+0.2
4,950,838	+		AO356_22115	0.55	-0.1
4,950,839	-		AO356_22115	0.55	-0.7
4,951,050	-				-0.3
4,951,050	-				+0.4
4,951,119	+				+0.3
4,951,119	+				+0.4
4,951,119	+				-0.4
4,951,120	-				+0.1
4,951,120	-				+1.6
4,951,120	-				+1.1
4,951,161	+				-0.1
4,951,161	+				+0.2
4,951,161	+				+0.6
4,951,161	+				-1.4
4,951,161	+				-0.6
4,951,161	+				+0.4
4,951,162	-				-0.1
4,951,162	-				-0.1
4,951,162	-				-0.8
4,951,162	-				+0.8
4,951,162	-				+0.4
4,951,217	-				-0.4
4,951,230	+				+0.3
4,951,259	-				+0.3
4,951,259	-				-0.8
4,951,259	-				+1.3
4,951,292	+				+0.1
4,951,293	-				-0.6
4,951,301	+				+0.2
4,951,301	+				-0.8
4,951,302	-				+0.5
4,951,302	-				-0.6
4,951,323	-		AO356_22120	0.12	-0.7
4,951,432	+		AO356_22120	0.25	+0.2
4,951,433	-		AO356_22120	0.25	-0.4
4,951,433	-		AO356_22120	0.25	-0.5
4,951,509	+		AO356_22120	0.33	+0.3
4,951,509	+		AO356_22120	0.33	+1.3
4,951,509	+		AO356_22120	0.33	+0.3
4,951,529	-		AO356_22120	0.36	+0.2
4,951,630	+		AO356_22120	0.47	-0.9
4,951,630	+		AO356_22120	0.47	+0.6
4,951,721	+		AO356_22120	0.57	+0.4
4,951,721	+		AO356_22120	0.57	-0.7
4,951,722	-		AO356_22120	0.57	-0.5
4,951,722	-		AO356_22120	0.57	+0.3
4,951,753	-		AO356_22120	0.61	+0.6
4,951,798	+		AO356_22120	0.66	-0.8
4,951,799	-		AO356_22120	0.66	-1.3
4,951,863	+		AO356_22120	0.73	+1.1
4,951,864	-		AO356_22120	0.74	-1.5
4,951,864	-		AO356_22120	0.74	+0.1
4,951,904	-		AO356_22120	0.78	-0.8
4,951,914	-		AO356_22120	0.79	+1.2
4,951,930	+		AO356_22120	0.81	-0.2
4,951,956	-		AO356_22120	0.84	-0.1
4,951,966	+		AO356_22120	0.85	+0.4
4,951,966	+		AO356_22120	0.85	+1.3
4,951,967	-		AO356_22120	0.85	-0.0
4,951,969	+		AO356_22120	0.85	+0.9
4,952,003	-		AO356_22120	0.89	-0.3
4,952,042	+				-2.1
4,952,043	-				+0.0
4,952,043	-				-2.4
4,952,043	-				-0.4
4,952,138	+				-0.1
4,952,153	+				+0.6
4,952,231	+				-0.7
4,952,231	+				+0.1
4,952,239	+				+1.0
4,952,240	-				-1.1
4,952,240	-				-0.8
4,952,357	+				+1.7
4,952,357	+				-0.3
4,952,358	-				+0.5
4,952,391	+				-0.0
4,952,391	+				+0.1
4,952,391	+				+0.3
4,952,391	+				+0.5
4,952,391	+				+0.5
4,952,391	+				+0.5
4,952,391	+				-0.2
4,952,392	-				-0.4
4,952,392	-				+0.2
4,952,392	-				-0.0
4,952,392	-				+0.0
4,952,411	+				-1.4
4,952,411	+				-0.1
4,952,411	+				-3.2
4,952,412	-				+0.6
4,952,426	+				-0.4
4,952,426	+				-0.8
4,952,426	+				-0.6
4,952,509	+				-0.0
4,952,509	+				-0.4
4,952,509	+				-0.7
4,952,509	+				+1.8
4,952,509	+				+0.1
4,952,509	+				+0.6
4,952,509	+				-0.2
4,952,509	+				+0.4
4,952,509	+				-0.9
4,952,510	-				-0.1
4,952,510	-				-0.1
4,952,510	-				-1.4
4,952,510	-				+1.4
4,952,510	-				+0.1
4,952,536	+				+0.0
4,952,537	-				+0.2
4,952,562	-				-0.6
4,952,562	-				+0.9
4,952,562	-				+0.1
4,952,569	+				-0.5
4,952,569	+				-1.4
4,952,569	+				-0.3
4,952,569	+				+0.3
4,952,570	-				-0.9
4,952,570	-				-0.1
4,952,570	-				+1.2
4,952,647	+				-0.4
4,952,647	+				-0.2
4,952,647	+				+0.8
4,952,648	-				-2.3
4,952,648	-				-1.6
4,952,648	-				-1.9
4,952,651	-				+0.6
4,952,809	+		AO356_22125	0.11	-0.6
4,952,809	+		AO356_22125	0.11	-0.3
4,952,810	-		AO356_22125	0.11	-1.0
4,952,933	-		AO356_22125	0.16	-0.7
4,952,933	-		AO356_22125	0.16	-2.4