Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_20850

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
4,644,008	+				+1.5
4,644,008	+				+0.6
4,644,008	+				+0.1
4,644,009	-				+0.0
4,644,009	-				-0.5
4,644,009	-				-0.3
4,644,009	-				-0.0
4,644,220	+		AO356_20845	0.24	-0.9
4,644,220	+		AO356_20845	0.24	-2.1
4,644,221	-		AO356_20845	0.24	-0.4
4,644,241	+		AO356_20845	0.26	-1.3
4,644,241	+		AO356_20845	0.26	+0.4
4,644,242	-		AO356_20845	0.26	-0.9
4,644,242	-		AO356_20845	0.26	-2.1
4,644,242	-		AO356_20845	0.26	+0.3
4,644,242	-		AO356_20845	0.26	-1.4
4,644,505	+		AO356_20845	0.52	+0.5
4,644,505	+		AO356_20845	0.52	-0.9
4,644,506	-		AO356_20845	0.52	-0.7
4,644,583	+		AO356_20845	0.60	-1.9
4,644,868	+		AO356_20845	0.89	-0.9
4,644,886	+				-0.6
4,644,886	+				+0.1
4,644,887	-				+0.4
4,644,887	-				-0.5
4,644,887	-				-1.0
4,644,887	-				-0.2
4,644,887	-				-1.0
4,644,898	+				-0.0
4,644,898	+				-0.3
4,644,898	+				-0.3
4,644,898	+				-0.7
4,644,899	-				-1.7
4,644,899	-				-1.5
4,645,101	+				+0.7
4,645,101	+				-1.3
4,645,101	+				-1.5
4,645,102	-				-2.5
4,645,286	-		AO356_20850	0.20	-0.3
4,645,286	-		AO356_20850	0.20	-0.1
4,645,381	-		AO356_20850	0.27	-0.1
4,645,381	-		AO356_20850	0.27	-1.4
4,645,797	+		AO356_20850	0.54	-1.5
4,645,798	-		AO356_20850	0.54	-0.1
4,646,175	+		AO356_20850	0.78	-1.2
4,646,175	+		AO356_20850	0.78	+0.1
4,646,176	-		AO356_20850	0.78	-0.7
4,646,176	-		AO356_20850	0.78	-0.6
4,646,176	-		AO356_20850	0.78	-1.5
4,646,176	-		AO356_20850	0.78	-0.1
4,646,434	-				-1.7
4,646,494	+				-1.5
4,646,513	+				+1.0
4,646,514	-				+0.3
4,646,514	-				-0.2
4,646,561	+				-0.1
4,646,561	+				-0.2
4,646,562	-				-0.2
4,646,562	-				-0.4
4,646,562	-				+0.4
4,646,565	+				+0.1
4,646,566	-		AO356_20855	0.10	-0.0
4,646,566	-		AO356_20855	0.10	+0.5
4,646,566	-		AO356_20855	0.10	-0.4
4,646,628	-		AO356_20855	0.22	+0.6
4,646,720	+		AO356_20855	0.39	-1.4
4,646,720	+		AO356_20855	0.39	-0.6
4,646,744	+		AO356_20855	0.43	-1.3
4,646,744	+		AO356_20855	0.43	-0.3
4,646,954	+		AO356_20855	0.82	-0.5
4,647,017	+				-0.9
4,647,017	+				-0.8
4,647,017	+				-0.4
4,647,018	-				+2.2
4,647,031	+				-0.4
4,647,031	+				+0.1
4,647,032	-				-0.4
4,647,048	+				+1.0
4,647,048	+				-0.8
4,647,048	+				-1.7
4,647,048	+				-0.4
4,647,048	+				+0.6
4,647,049	-				-0.0
4,647,049	-				+1.0
4,647,049	-				+0.0
4,647,049	-				-0.2
4,647,049	-				+0.1
4,647,049	-				-1.4
4,647,049	-				+0.0
4,647,049	-				-0.4
4,647,095	+				-1.2
4,647,096	-				+0.1
4,647,096	-				+0.6
4,647,129	+				-1.9
4,647,130	-				-0.9
4,647,148	-				-0.0
4,647,162	-				-1.0
4,647,162	-				-0.1
4,647,162	-				+0.2
4,647,238	+				+0.1
4,647,278	+				-0.5
4,647,278	+				-0.6
4,647,279	-				+0.4
4,647,279	-				+0.6
4,647,279	-				+0.8
4,647,479	+		AO356_20860	0.21	-0.2
4,647,479	+		AO356_20860	0.21	+0.1
4,647,479	+		AO356_20860	0.21	+0.8
4,647,480	-		AO356_20860	0.21	+0.5