Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19920

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
4,462,263	+		AO356_19915	0.40	+0.6
4,462,263	+		AO356_19915	0.40	+1.4
4,462,264	-		AO356_19915	0.40	-0.2
4,462,264	-		AO356_19915	0.40	+0.5
4,462,264	-		AO356_19915	0.40	-0.4
4,462,327	+		AO356_19915	0.44	-0.2
4,462,351	-		AO356_19915	0.46	+0.7
4,462,351	-		AO356_19915	0.46	+0.0
4,462,383	-		AO356_19915	0.48	+0.7
4,462,482	+		AO356_19915	0.55	-0.7
4,462,482	+		AO356_19915	0.55	+0.3
4,462,483	-		AO356_19915	0.55	+0.6
4,462,483	-		AO356_19915	0.55	+0.8
4,462,497	+		AO356_19915	0.56	+0.6
4,462,497	+		AO356_19915	0.56	-0.7
4,462,554	+		AO356_19915	0.60	-0.3
4,462,555	-		AO356_19915	0.60	-0.9
4,462,557	+		AO356_19915	0.60	-0.7
4,462,558	-		AO356_19915	0.60	-0.1
4,462,595	-		AO356_19915	0.62	+0.6
4,462,611	-		AO356_19915	0.64	+0.2
4,462,651	+		AO356_19915	0.66	+0.8
4,462,651	+		AO356_19915	0.66	+0.8
4,462,652	-		AO356_19915	0.66	-0.2
4,462,652	-		AO356_19915	0.66	+1.2
4,462,653	+		AO356_19915	0.66	-0.4
4,462,653	+		AO356_19915	0.66	-1.0
4,462,653	+		AO356_19915	0.66	+1.3
4,462,653	+		AO356_19915	0.66	-0.4
4,462,729	+		AO356_19915	0.71	+0.9
4,462,731	+		AO356_19915	0.72	+0.6
4,462,732	-		AO356_19915	0.72	-1.4
4,462,732	-		AO356_19915	0.72	+0.2
4,462,732	-		AO356_19915	0.72	+0.1
4,462,732	-		AO356_19915	0.72	-0.4
4,462,732	-		AO356_19915	0.72	-1.7
4,462,732	-		AO356_19915	0.72	-0.4
4,462,751	+		AO356_19915	0.73	+0.3
4,462,794	+		AO356_19915	0.76	+0.7
4,462,794	+		AO356_19915	0.76	-1.8
4,462,795	-		AO356_19915	0.76	+2.5
4,462,797	+		AO356_19915	0.76	+0.3
4,462,797	+		AO356_19915	0.76	+0.8
4,462,797	+		AO356_19915	0.76	+0.9
4,462,798	-		AO356_19915	0.76	+0.2
4,462,798	-		AO356_19915	0.76	+0.9
4,462,800	+		AO356_19915	0.76	+0.5
4,462,801	-		AO356_19915	0.76	-0.7
4,462,821	+		AO356_19915	0.78	+0.1
4,462,822	-		AO356_19915	0.78	+1.7
4,462,846	+		AO356_19915	0.79	-0.4
4,462,846	+		AO356_19915	0.79	+0.8
4,462,846	+		AO356_19915	0.79	-0.7
4,462,847	-		AO356_19915	0.79	-0.2
4,463,090	+				-0.1
4,463,091	-				-0.3
4,463,242	-				-0.3
4,463,390	+		AO356_19920	0.19	-0.1
4,463,477	+		AO356_19920	0.31	-1.2
4,463,477	+		AO356_19920	0.31	-0.1
4,463,477	+		AO356_19920	0.31	-0.8
4,463,477	+		AO356_19920	0.31	+0.3
4,463,478	-		AO356_19920	0.31	-0.2
4,463,478	-		AO356_19920	0.31	-0.8
4,463,478	-		AO356_19920	0.31	-0.4
4,463,535	+		AO356_19920	0.39	-0.4
4,463,536	-		AO356_19920	0.39	-0.2
4,463,565	-		AO356_19920	0.43	-1.1
4,463,595	+		AO356_19920	0.48	-1.0
4,463,596	-		AO356_19920	0.48	+1.5
4,463,653	+		AO356_19920	0.56	+0.1
4,463,654	-		AO356_19920	0.56	-0.2
4,463,654	-		AO356_19920	0.56	-0.9
4,463,654	-		AO356_19920	0.56	-0.7
4,463,654	-		AO356_19920	0.56	-0.2
4,463,654	-		AO356_19920	0.56	-0.2
4,463,667	-		AO356_19920	0.58	-0.3
4,463,721	-		AO356_19920	0.65	-0.1
4,463,757	-		AO356_19920	0.70	-0.7
4,463,757	-		AO356_19920	0.70	-1.0
4,463,787	-		AO356_19920	0.75	-0.1
4,463,859	+		AO356_19920	0.85	+0.7
4,463,993	-				-0.4
4,464,175	+				-0.9
4,464,176	-				+0.9
4,464,177	+				+0.0
4,464,201	+				-0.9
4,464,202	-				-1.8
4,464,256	+		AO356_19925	0.21	+0.3
4,464,256	+		AO356_19925	0.21	+1.1
4,464,314	+		AO356_19925	0.34	+0.7
4,464,327	+		AO356_19925	0.37	-1.0
4,464,327	+		AO356_19925	0.37	-0.2
4,464,327	+		AO356_19925	0.37	-0.3
4,464,328	-		AO356_19925	0.37	-0.5
4,464,348	-		AO356_19925	0.42	-1.1
4,464,405	+		AO356_19925	0.55	-0.9
4,464,424	-		AO356_19925	0.59	+0.3
4,464,467	+		AO356_19925	0.69	+0.1
4,464,467	+		AO356_19925	0.69	-0.1
4,464,468	-		AO356_19925	0.70	-0.0
4,464,468	-		AO356_19925	0.70	-0.0
4,464,514	+		AO356_19925	0.80	+0.2
4,464,514	+		AO356_19925	0.80	+0.1
4,464,515	-		AO356_19925	0.81	-0.1
4,464,515	-		AO356_19925	0.81	+0.7
4,464,515	-		AO356_19925	0.81	-0.0
4,464,515	-		AO356_19925	0.81	-2.0
4,464,515	-		AO356_19925	0.81	-0.4
4,464,515	-		AO356_19925	0.81	-1.7
4,464,533	+		AO356_19925	0.85	+1.0
4,464,533	+		AO356_19925	0.85	+0.5
4,464,533	+		AO356_19925	0.85	-0.2
4,464,533	+		AO356_19925	0.85	+0.2
4,464,571	+				+0.1
4,464,670	+				+0.7
4,464,670	+				-0.3
4,464,670	+				+0.7
4,464,695	+				+0.1
4,464,695	+				+1.1
4,464,695	+				+0.7
4,464,696	-				-1.0
4,464,697	+				+1.0
4,464,697	+				+1.0
4,464,697	+				+0.7
4,464,698	-				+0.4
4,464,832	-		AO356_19930	0.12	+0.8
4,464,855	+		AO356_19930	0.15	-0.3
4,464,855	+		AO356_19930	0.15	-0.5
4,464,856	-		AO356_19930	0.15	+0.7
4,464,856	-		AO356_19930	0.15	+0.2
4,464,879	+		AO356_19930	0.17	+0.1
4,464,880	-		AO356_19930	0.17	-1.9