Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_13235
Experiment: Cephalothin 2 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 2 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,008,311 | + | AO356_13230 | 0.42 | -0.3 | |
3,008,311 | + | AO356_13230 | 0.42 | -0.4 | |
3,008,312 | - | AO356_13230 | 0.42 | -0.8 | |
3,008,312 | - | AO356_13230 | 0.42 | -0.0 | |
3,008,312 | - | AO356_13230 | 0.42 | -0.3 | |
3,008,535 | + | AO356_13230 | 0.59 | -0.1 | |
3,008,535 | + | AO356_13230 | 0.59 | +0.0 | |
3,008,535 | + | AO356_13230 | 0.59 | -0.8 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.3 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.3 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.8 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.2 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.5 | |
3,008,536 | - | AO356_13230 | 0.59 | +0.2 | |
3,009,172 | + | -0.1 | |||
3,009,695 | + | +0.1 | |||
3,009,695 | + | +0.4 | |||
3,009,696 | - | +0.6 | |||
3,009,696 | - | +0.1 | |||
3,009,696 | - | -0.8 | |||
3,010,188 | + | AO356_13240 | 0.27 | -0.1 | |
3,010,403 | + | AO356_13240 | 0.42 | -1.0 | |
3,010,403 | + | AO356_13240 | 0.42 | +0.9 | |
3,010,403 | + | AO356_13240 | 0.42 | +0.3 | |
3,010,404 | - | AO356_13240 | 0.42 | -0.4 | |
3,010,490 | + | AO356_13240 | 0.49 | +0.2 | |
3,010,491 | - | AO356_13240 | 0.49 | +1.3 |
Or see this region's nucleotide sequence