Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12985

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,955,577	+		AO356_12980	0.11	-1.0
2,955,577	+		AO356_12980	0.11	+0.8
2,955,577	+		AO356_12980	0.11	+1.4
2,955,577	+		AO356_12980	0.11	-0.1
2,955,578	-		AO356_12980	0.11	+0.0
2,955,578	-		AO356_12980	0.11	+0.2
2,955,578	-		AO356_12980	0.11	-0.3
2,955,758	+		AO356_12980	0.29	+0.9
2,955,759	-		AO356_12980	0.29	+0.1
2,955,759	-		AO356_12980	0.29	+0.4
2,955,770	+		AO356_12980	0.31	+1.1
2,955,770	+		AO356_12980	0.31	-0.2
2,955,770	+		AO356_12980	0.31	-0.6
2,955,770	+		AO356_12980	0.31	+0.6
2,955,770	+		AO356_12980	0.31	-0.3
2,955,770	+		AO356_12980	0.31	+0.2
2,955,770	+		AO356_12980	0.31	-0.2
2,955,770	+		AO356_12980	0.31	-0.3
2,955,770	+		AO356_12980	0.31	+1.0
2,955,771	-		AO356_12980	0.31	+1.7
2,955,771	-		AO356_12980	0.31	+0.4
2,955,771	-		AO356_12980	0.31	-0.3
2,955,771	-		AO356_12980	0.31	-0.2
2,955,771	-		AO356_12980	0.31	-0.0
2,955,771	-		AO356_12980	0.31	-0.3
2,955,771	-		AO356_12980	0.31	+1.0
2,955,771	-		AO356_12980	0.31	-0.5
2,956,108	+		AO356_12980	0.66	-0.3
2,956,108	+		AO356_12980	0.66	+1.2
2,956,108	+		AO356_12980	0.66	+0.2
2,956,108	+		AO356_12980	0.66	+0.4
2,956,108	+		AO356_12980	0.66	-0.1
2,956,108	+		AO356_12980	0.66	+0.9
2,956,109	-		AO356_12980	0.66	-0.4
2,956,109	-		AO356_12980	0.66	+0.4
2,956,109	-		AO356_12980	0.66	+0.8
2,956,109	-		AO356_12980	0.66	+0.3
2,956,109	-		AO356_12980	0.66	+0.1
2,956,109	-		AO356_12980	0.66	-2.2
2,956,109	-		AO356_12980	0.66	-0.4
2,956,109	-		AO356_12980	0.66	+0.9
2,956,109	-		AO356_12980	0.66	-0.5
2,956,109	-		AO356_12980	0.66	-1.9
2,956,109	-		AO356_12980	0.66	-0.5
2,956,109	-		AO356_12980	0.66	+0.0
2,956,109	-		AO356_12980	0.66	+1.0
2,956,109	-		AO356_12980	0.66	+0.0
2,956,109	-		AO356_12980	0.66	+0.7
2,956,210	+		AO356_12980	0.76	+0.4
2,956,210	+		AO356_12980	0.76	-1.3
2,956,210	+		AO356_12980	0.76	-0.1
2,956,210	+		AO356_12980	0.76	+0.8
2,956,210	+		AO356_12980	0.76	-0.4
2,956,210	+		AO356_12980	0.76	-1.0
2,956,210	+		AO356_12980	0.76	+0.8
2,956,211	-		AO356_12980	0.76	-0.4
2,956,211	-		AO356_12980	0.76	+0.7
2,956,211	-		AO356_12980	0.76	-0.2
2,956,211	-		AO356_12980	0.76	-0.4
2,956,422	+				+0.9
2,956,422	+				+0.7
2,956,422	+				+0.6
2,956,422	+				+0.6
2,956,422	+				-0.4
2,956,422	+				+0.5
2,956,422	+				+0.0
2,956,423	-				+0.0
2,956,423	-				+1.0
2,956,423	-				-1.7
2,956,423	-				+0.5
2,956,423	-				-0.6
2,956,423	-				+0.5
2,956,423	-				-0.2
2,956,423	-				+0.0
2,956,423	-				-0.2
2,956,423	-				+0.0
2,956,423	-				+0.0
2,956,423	-				+0.8
2,956,423	-				-0.5
2,956,458	+				-0.6
2,956,458	+				+0.5
2,956,458	+				+0.4
2,956,459	-				+0.3
2,956,459	-				+1.3
2,956,460	+				-0.2
2,956,461	-				-0.7
2,956,500	+				-0.1
2,956,510	+				+0.6
2,956,510	+				+0.6
2,956,510	+				-1.4
2,956,510	+				+0.0
2,956,510	+				-0.0
2,956,510	+				-0.0
2,956,510	+				-0.5
2,956,510	+				+0.9
2,956,511	-				+0.0
2,956,511	-				+0.4
2,956,511	-				-0.8
2,956,511	-				-0.5
2,956,633	+		AO356_12985	0.25	+0.2
2,956,633	+		AO356_12985	0.25	-0.1
2,956,633	+		AO356_12985	0.25	+1.4
2,956,633	+		AO356_12985	0.25	-0.0
2,956,634	-		AO356_12985	0.25	+0.8
2,956,634	-		AO356_12985	0.25	+0.7
2,956,634	-		AO356_12985	0.25	+0.6
2,956,726	+		AO356_12985	0.46	+1.0
2,956,726	+		AO356_12985	0.46	-0.4
2,956,726	+		AO356_12985	0.46	+0.6
2,956,727	-		AO356_12985	0.46	+1.0
2,956,727	-		AO356_12985	0.46	+1.3
2,956,751	+		AO356_12985	0.51	+1.1
2,956,751	+		AO356_12985	0.51	-0.6
2,956,752	-		AO356_12985	0.51	+0.9
2,956,822	+		AO356_12985	0.67	+0.5
2,956,822	+		AO356_12985	0.67	-0.4
2,956,876	+		AO356_12985	0.79	-0.1
2,956,877	-		AO356_12985	0.79	-0.6
2,956,877	-		AO356_12985	0.79	-0.3
2,956,877	-		AO356_12985	0.79	-0.1
2,956,964	-				+0.0
2,956,964	-				+0.6
2,956,995	-				+0.3
2,957,002	+				-2.7
2,957,002	+				+0.3
2,957,002	+				-1.7
2,957,003	-				-2.1
2,957,003	-				+0.4
2,957,003	-				-0.6
2,957,115	-				-0.3
2,957,144	+				-0.1
2,957,144	+				+0.3
2,957,144	+				+0.1
2,957,144	+				+0.0
2,957,144	+				-0.5
2,957,144	+				-1.7
2,957,278	-				-0.4
2,957,359	+				+1.1
2,957,359	+				-0.5
2,957,359	+				-0.2
2,957,360	-				-1.8
2,957,360	-				-0.5
2,957,360	-				-0.4
2,957,361	+				+1.3
2,957,361	+				-0.2
2,957,361	+				+0.3
2,957,361	+				-0.4
2,957,361	+				+0.3
2,957,362	-				-0.6
2,957,362	-				+0.4
2,957,362	-				-0.9
2,957,362	-				+1.0
2,957,362	-				-1.9
2,957,362	-				+1.4
2,957,362	-				-0.5
2,957,362	-				+0.1
2,957,362	-				-2.6
2,957,362	-				+0.5
2,957,362	-				+0.8
2,957,362	-				-0.2
2,957,493	+		AO356_12990	0.25	-1.4
2,957,511	+		AO356_12990	0.28	+0.5
2,957,511	+		AO356_12990	0.28	+1.3
2,957,511	+		AO356_12990	0.28	+0.0
2,957,512	-		AO356_12990	0.28	+0.5
2,957,531	+		AO356_12990	0.32	-1.4
2,957,721	+		AO356_12990	0.62	-0.1
2,957,721	+		AO356_12990	0.62	-0.5
2,957,721	+		AO356_12990	0.62	-0.5
2,957,721	+		AO356_12990	0.62	+0.0
2,957,721	+		AO356_12990	0.62	-0.5
2,957,721	+		AO356_12990	0.62	+1.4
2,957,721	+		AO356_12990	0.62	+0.7
2,957,721	+		AO356_12990	0.62	+1.1
2,957,722	-		AO356_12990	0.62	+0.1
2,957,722	-		AO356_12990	0.62	-1.0
2,957,722	-		AO356_12990	0.62	-0.1
2,957,722	-		AO356_12990	0.62	+1.9
2,957,722	-		AO356_12990	0.62	-0.2
2,957,722	-		AO356_12990	0.62	-1.1
2,957,722	-		AO356_12990	0.62	-0.5
2,957,722	-		AO356_12990	0.62	+0.7
2,957,722	-		AO356_12990	0.62	+0.0
2,957,722	-		AO356_12990	0.62	+0.1
2,957,793	+		AO356_12990	0.74	-0.2
2,957,793	+		AO356_12990	0.74	+0.0
2,957,794	-		AO356_12990	0.74	+2.4
2,957,794	-		AO356_12990	0.74	-1.0
2,957,847	+		AO356_12990	0.83	-2.1
2,957,848	-		AO356_12990	0.83	+2.4
2,957,848	-		AO356_12990	0.83	-1.0