Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12975

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,951,930	+		AO356_12970	0.26	+0.1
2,951,956	+		AO356_12970	0.29	-0.1
2,951,956	+		AO356_12970	0.29	+1.0
2,951,957	-		AO356_12970	0.29	-0.4
2,951,957	-		AO356_12970	0.29	-0.7
2,952,313	+		AO356_12970	0.61	+0.7
2,952,313	+		AO356_12970	0.61	+0.8
2,952,313	+		AO356_12970	0.61	+1.1
2,952,313	+		AO356_12970	0.61	+0.3
2,952,313	+		AO356_12970	0.61	+0.3
2,952,313	+		AO356_12970	0.61	+0.3
2,952,313	+		AO356_12970	0.61	+0.6
2,952,313	+		AO356_12970	0.61	+0.4
2,952,313	+		AO356_12970	0.61	+0.5
2,952,314	-		AO356_12970	0.61	+0.2
2,952,314	-		AO356_12970	0.61	+0.3
2,952,314	-		AO356_12970	0.61	+0.3
2,952,349	+		AO356_12970	0.64	-0.5
2,952,349	+		AO356_12970	0.64	+0.8
2,952,402	+		AO356_12970	0.69	-1.3
2,952,402	+		AO356_12970	0.69	+0.5
2,952,402	+		AO356_12970	0.69	-0.2
2,952,469	+		AO356_12970	0.75	+0.6
2,952,469	+		AO356_12970	0.75	-1.1
2,952,470	-		AO356_12970	0.75	+0.4
2,952,470	-		AO356_12970	0.75	-1.2
2,952,505	+		AO356_12970	0.78	+0.6
2,952,641	+				+0.0
2,952,641	+				-0.2
2,952,642	-				-0.1
2,952,642	-				-0.0
2,952,643	+				-0.5
2,952,643	+				+0.6
2,952,643	+				+0.4
2,952,643	+				+0.6
2,952,643	+				-0.7
2,952,643	+				+1.3
2,952,643	+				+0.3
2,952,643	+				-0.2
2,952,643	+				+0.1
2,952,643	+				-0.1
2,952,644	-				+0.6
2,952,644	-				+0.4
2,952,644	-				+0.0
2,952,644	-				-1.4
2,952,644	-				+0.9
2,952,644	-				-1.4
2,952,644	-				-2.0
2,952,644	-				+0.5
2,952,644	-				-0.3
2,952,644	-				-2.3
2,952,644	-				-0.2
2,952,644	-				+0.6
2,952,644	-				-0.2
2,952,644	-				+1.9
2,952,644	-				-0.1
2,952,644	-				+0.9
2,952,644	-				+0.3
2,952,644	-				+0.5
2,952,836	+				-0.4
2,952,836	+				-0.0
2,952,836	+				-0.2
2,952,836	+				-0.2
2,952,836	+				-0.3
2,952,836	+				-0.1
2,952,837	-				-0.3
2,952,837	-				+0.6
2,952,837	-				-0.2
2,952,837	-				-0.7
2,952,837	-				+0.8
2,953,074	+		AO356_12975	0.12	+0.9
2,953,074	+		AO356_12975	0.12	-0.6
2,953,075	-		AO356_12975	0.12	-0.6
2,953,075	-		AO356_12975	0.12	+1.5
2,953,075	-		AO356_12975	0.12	+0.3
2,953,185	+		AO356_12975	0.16	+0.5
2,953,186	-		AO356_12975	0.16	+0.5
2,953,198	+		AO356_12975	0.16	-0.4
2,953,236	+		AO356_12975	0.18	-0.1
2,953,236	+		AO356_12975	0.18	+0.2
2,953,236	+		AO356_12975	0.18	+1.5
2,953,237	-		AO356_12975	0.18	-0.5
2,953,237	-		AO356_12975	0.18	+0.4
2,953,237	-		AO356_12975	0.18	+0.2
2,953,368	+		AO356_12975	0.23	-0.8
2,953,369	-		AO356_12975	0.23	+0.7
2,953,470	+		AO356_12975	0.26	-0.8
2,953,470	+		AO356_12975	0.26	-1.6
2,953,470	+		AO356_12975	0.26	+0.5
2,953,470	+		AO356_12975	0.26	-0.0
2,953,470	+		AO356_12975	0.26	-0.5
2,953,470	+		AO356_12975	0.26	-0.2
2,953,470	+		AO356_12975	0.26	-0.1
2,953,470	+		AO356_12975	0.26	-0.8
2,953,470	+		AO356_12975	0.26	-0.3
2,953,471	-		AO356_12975	0.26	+0.6
2,953,471	-		AO356_12975	0.26	+0.4
2,953,471	-		AO356_12975	0.26	+0.9
2,953,471	-		AO356_12975	0.26	-0.7
2,953,471	-		AO356_12975	0.26	-0.8
2,953,471	-		AO356_12975	0.26	-0.0
2,953,471	-		AO356_12975	0.26	+0.5
2,953,471	-		AO356_12975	0.26	-0.0
2,953,471	-		AO356_12975	0.26	+1.6
2,953,471	-		AO356_12975	0.26	+0.7
2,953,545	+		AO356_12975	0.29	-0.8
2,953,546	-		AO356_12975	0.29	+0.5
2,953,546	-		AO356_12975	0.29	+0.3
2,953,571	+		AO356_12975	0.30	+1.2
2,953,572	-		AO356_12975	0.30	+0.6
2,953,572	-		AO356_12975	0.30	+0.1
2,953,572	-		AO356_12975	0.30	+0.2
2,953,657	-		AO356_12975	0.33	-1.3
2,953,683	+		AO356_12975	0.34	+1.3
2,953,683	+		AO356_12975	0.34	+0.5
2,953,684	-		AO356_12975	0.34	+0.1
2,953,684	-		AO356_12975	0.34	-0.3
2,953,684	-		AO356_12975	0.34	+0.3
2,953,684	-		AO356_12975	0.34	+0.9
2,953,684	-		AO356_12975	0.34	+0.2
2,953,684	-		AO356_12975	0.34	+0.1
2,953,684	-		AO356_12975	0.34	-0.7
2,953,684	-		AO356_12975	0.34	-0.3
2,954,062	+		AO356_12975	0.48	+0.5
2,954,062	+		AO356_12975	0.48	+0.2
2,954,063	-		AO356_12975	0.48	+0.1
2,954,063	-		AO356_12975	0.48	+0.5
2,954,409	+		AO356_12975	0.61	-0.5
2,954,865	+		AO356_12975	0.77	-2.2
2,954,865	+		AO356_12975	0.77	-0.1
2,954,865	+		AO356_12975	0.77	+0.5
2,954,865	+		AO356_12975	0.77	-0.2
2,954,866	-		AO356_12975	0.78	+1.7
2,954,866	-		AO356_12975	0.78	+0.2
2,954,866	-		AO356_12975	0.78	+0.5
2,954,866	-		AO356_12975	0.78	+0.4
2,954,866	-		AO356_12975	0.78	+0.8
2,954,866	-		AO356_12975	0.78	+0.2
2,954,866	-		AO356_12975	0.78	+1.0
2,954,866	-		AO356_12975	0.78	+0.5
2,954,918	+		AO356_12975	0.79	-0.3
2,954,918	+		AO356_12975	0.79	+0.7
2,954,918	+		AO356_12975	0.79	+1.0
2,954,918	+		AO356_12975	0.79	+0.7
2,954,918	+		AO356_12975	0.79	+1.2
2,954,919	-		AO356_12975	0.79	+0.7
2,954,919	-		AO356_12975	0.79	-1.1
2,954,919	-		AO356_12975	0.79	+1.2
2,954,919	-		AO356_12975	0.79	-0.2
2,955,187	-		AO356_12975	0.89	+0.2
2,955,187	-		AO356_12975	0.89	-1.4
2,955,223	+				+1.1
2,955,224	-				+0.0
2,955,224	-				+0.7
2,955,275	+				-0.7
2,955,275	+				+0.6
2,955,276	-				+0.4
2,955,276	-				-1.5
2,955,276	-				+0.3
2,955,518	+				-0.2
2,955,519	-				-0.2
2,955,577	+		AO356_12980	0.11	-1.0
2,955,577	+		AO356_12980	0.11	+0.8
2,955,577	+		AO356_12980	0.11	+1.4
2,955,577	+		AO356_12980	0.11	-0.1
2,955,578	-		AO356_12980	0.11	+0.0
2,955,578	-		AO356_12980	0.11	+0.2
2,955,578	-		AO356_12980	0.11	-0.3
2,955,758	+		AO356_12980	0.29	+0.9
2,955,759	-		AO356_12980	0.29	+0.1
2,955,759	-		AO356_12980	0.29	+0.4
2,955,770	+		AO356_12980	0.31	+1.1
2,955,770	+		AO356_12980	0.31	-0.2
2,955,770	+		AO356_12980	0.31	-0.6
2,955,770	+		AO356_12980	0.31	+0.6
2,955,770	+		AO356_12980	0.31	-0.3
2,955,770	+		AO356_12980	0.31	+0.2
2,955,770	+		AO356_12980	0.31	-0.2
2,955,770	+		AO356_12980	0.31	-0.3
2,955,770	+		AO356_12980	0.31	+1.0
2,955,771	-		AO356_12980	0.31	+1.7
2,955,771	-		AO356_12980	0.31	+0.4
2,955,771	-		AO356_12980	0.31	-0.3
2,955,771	-		AO356_12980	0.31	-0.2
2,955,771	-		AO356_12980	0.31	-0.0
2,955,771	-		AO356_12980	0.31	-0.3
2,955,771	-		AO356_12980	0.31	+1.0
2,955,771	-		AO356_12980	0.31	-0.5
2,956,108	+		AO356_12980	0.66	-0.3
2,956,108	+		AO356_12980	0.66	+1.2
2,956,108	+		AO356_12980	0.66	+0.2
2,956,108	+		AO356_12980	0.66	+0.4
2,956,108	+		AO356_12980	0.66	-0.1
2,956,108	+		AO356_12980	0.66	+0.9
2,956,109	-		AO356_12980	0.66	-0.4
2,956,109	-		AO356_12980	0.66	+0.4
2,956,109	-		AO356_12980	0.66	+0.8
2,956,109	-		AO356_12980	0.66	+0.3
2,956,109	-		AO356_12980	0.66	+0.1
2,956,109	-		AO356_12980	0.66	-2.2
2,956,109	-		AO356_12980	0.66	-0.4
2,956,109	-		AO356_12980	0.66	+0.9
2,956,109	-		AO356_12980	0.66	-0.5
2,956,109	-		AO356_12980	0.66	-1.9
2,956,109	-		AO356_12980	0.66	-0.5
2,956,109	-		AO356_12980	0.66	+0.0
2,956,109	-		AO356_12980	0.66	+1.0
2,956,109	-		AO356_12980	0.66	+0.0
2,956,109	-		AO356_12980	0.66	+0.7
2,956,210	+		AO356_12980	0.76	+0.4
2,956,210	+		AO356_12980	0.76	-1.3
2,956,210	+		AO356_12980	0.76	-0.1
2,956,210	+		AO356_12980	0.76	+0.8
2,956,210	+		AO356_12980	0.76	-0.4
2,956,210	+		AO356_12980	0.76	-1.0
2,956,210	+		AO356_12980	0.76	+0.8
2,956,211	-		AO356_12980	0.76	-0.4
2,956,211	-		AO356_12980	0.76	+0.7
2,956,211	-		AO356_12980	0.76	-0.2
2,956,211	-		AO356_12980	0.76	-0.4
2,956,422	+				+0.9
2,956,422	+				+0.7
2,956,422	+				+0.6
2,956,422	+				+0.6
2,956,422	+				-0.4
2,956,422	+				+0.5
2,956,422	+				+0.0
2,956,423	-				+0.0
2,956,423	-				+1.0
2,956,423	-				-1.7
2,956,423	-				+0.5
2,956,423	-				-0.6
2,956,423	-				+0.5
2,956,423	-				-0.2
2,956,423	-				+0.0
2,956,423	-				-0.2
2,956,423	-				+0.0
2,956,423	-				+0.0
2,956,423	-				+0.8
2,956,423	-				-0.5
2,956,458	+				-0.6
2,956,458	+				+0.5
2,956,458	+				+0.4
2,956,459	-				+0.3
2,956,459	-				+1.3
2,956,460	+				-0.2
2,956,461	-				-0.7