Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_12240

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,790,831	+				+0.5
2,790,831	+				+0.2
2,790,832	-				-0.4
2,790,832	-				-0.5
2,790,832	-				+0.8
2,791,004	+				+0.8
2,791,004	+				+0.5
2,791,004	+				-0.5
2,791,004	+				-0.3
2,791,004	+				-0.9
2,791,359	+		AO356_12235	0.20	+1.0
2,791,359	+		AO356_12235	0.20	-0.6
2,791,360	-		AO356_12235	0.20	+0.5
2,791,360	-		AO356_12235	0.20	+1.2
2,791,360	-		AO356_12235	0.20	+1.3
2,791,701	+				-0.2
2,791,701	+				+2.1
2,791,872	+				+3.0
2,791,872	+				-0.8
2,791,872	+				+0.7
2,791,872	+				-0.5
2,791,873	-				-0.2
2,791,873	-				+0.4
2,791,886	+				-1.8
2,791,943	+		AO356_12240	0.11	-0.3
2,791,943	+		AO356_12240	0.11	-0.1
2,791,944	-		AO356_12240	0.11	+0.4
2,791,944	-		AO356_12240	0.11	-1.0
2,791,944	-		AO356_12240	0.11	-1.2
2,791,944	-		AO356_12240	0.11	-0.8
2,791,944	-		AO356_12240	0.11	-0.4
2,791,977	+		AO356_12240	0.13	+1.0
2,791,977	+		AO356_12240	0.13	+0.5
2,792,150	-		AO356_12240	0.22	+1.0
2,792,166	+		AO356_12240	0.23	+0.1
2,792,166	+		AO356_12240	0.23	-0.4
2,792,166	+		AO356_12240	0.23	+0.2
2,792,166	+		AO356_12240	0.23	-0.4
2,792,166	+		AO356_12240	0.23	+0.6
2,792,166	+		AO356_12240	0.23	+0.4
2,792,167	-		AO356_12240	0.23	+0.1
2,792,167	-		AO356_12240	0.23	+0.5
2,792,167	-		AO356_12240	0.23	-1.5
2,792,167	-		AO356_12240	0.23	+0.3
2,792,167	-		AO356_12240	0.23	-0.3
2,792,167	-		AO356_12240	0.23	-0.4
2,792,167	-		AO356_12240	0.23	+0.2
2,792,307	+		AO356_12240	0.30	-0.0
2,792,479	-		AO356_12240	0.39	-0.1
2,792,543	+		AO356_12240	0.42	-0.3
2,792,617	+		AO356_12240	0.46	+0.8
2,792,688	+		AO356_12240	0.50	+0.7
2,792,688	+		AO356_12240	0.50	-0.0
2,792,688	+		AO356_12240	0.50	-0.0
2,792,688	+		AO356_12240	0.50	-0.3
2,792,688	+		AO356_12240	0.50	-0.3
2,792,689	-		AO356_12240	0.50	-0.1
2,792,689	-		AO356_12240	0.50	+1.3
2,792,689	-		AO356_12240	0.50	-0.8
2,792,689	-		AO356_12240	0.50	+0.5
2,792,692	-		AO356_12240	0.50	-0.1
2,792,713	-		AO356_12240	0.51	-0.4
2,792,713	-		AO356_12240	0.51	+0.0
2,792,713	-		AO356_12240	0.51	+0.1
2,792,844	+		AO356_12240	0.58	-1.5
2,792,844	+		AO356_12240	0.58	+0.4
2,792,845	-		AO356_12240	0.58	+0.3
2,792,871	+		AO356_12240	0.59	+0.0
2,792,871	+		AO356_12240	0.59	+0.9
2,792,871	+		AO356_12240	0.59	-1.8
2,792,871	+		AO356_12240	0.59	+0.8
2,792,872	-		AO356_12240	0.59	+0.8
2,792,872	-		AO356_12240	0.59	+1.3
2,792,872	-		AO356_12240	0.59	-1.0
2,792,872	-		AO356_12240	0.59	+0.4
2,792,884	-		AO356_12240	0.60	+0.2
2,792,890	-		AO356_12240	0.60	-0.0
2,792,890	-		AO356_12240	0.60	+0.3
2,792,899	-		AO356_12240	0.60	-0.0
2,792,970	+		AO356_12240	0.64	-0.3
2,792,970	+		AO356_12240	0.64	-0.3
2,792,970	+		AO356_12240	0.64	-0.8
2,793,028	+		AO356_12240	0.67	-0.7
2,793,028	+		AO356_12240	0.67	-0.2
2,793,029	-		AO356_12240	0.67	+0.7
2,793,064	-		AO356_12240	0.69	-0.2
2,793,064	-		AO356_12240	0.69	+0.9
2,793,066	+		AO356_12240	0.69	-1.7
2,793,066	+		AO356_12240	0.69	-0.1
2,793,066	+		AO356_12240	0.69	+0.8
2,793,066	+		AO356_12240	0.69	-0.3
2,793,066	+		AO356_12240	0.69	+0.3
2,793,066	+		AO356_12240	0.69	+0.4
2,793,066	+		AO356_12240	0.69	-0.1
2,793,066	+		AO356_12240	0.69	-0.1
2,793,067	-		AO356_12240	0.69	-0.1
2,793,067	-		AO356_12240	0.69	-0.3
2,793,072	-		AO356_12240	0.69	-0.7
2,793,108	+		AO356_12240	0.71	+0.7
2,793,159	+		AO356_12240	0.74	+0.9
2,793,159	+		AO356_12240	0.74	-0.4
2,793,159	+		AO356_12240	0.74	+0.5
2,793,159	+		AO356_12240	0.74	+0.1
2,793,159	+		AO356_12240	0.74	-0.9
2,793,159	+		AO356_12240	0.74	+0.5
2,793,162	+		AO356_12240	0.74	+0.5
2,793,162	+		AO356_12240	0.74	+0.1
2,793,162	+		AO356_12240	0.74	+0.3
2,793,162	+		AO356_12240	0.74	+0.8
2,793,162	+		AO356_12240	0.74	-0.5
2,793,162	+		AO356_12240	0.74	+1.3
2,793,162	+		AO356_12240	0.74	+0.2
2,793,163	-		AO356_12240	0.74	+0.3
2,793,163	-		AO356_12240	0.74	+0.2
2,793,228	+		AO356_12240	0.77	+0.4
2,793,243	+		AO356_12240	0.78	+0.8
2,793,243	+		AO356_12240	0.78	+0.6
2,793,244	-		AO356_12240	0.78	+0.1
2,793,244	-		AO356_12240	0.78	-1.4
2,793,244	-		AO356_12240	0.78	+0.1
2,793,244	-		AO356_12240	0.78	+0.4
2,793,390	+		AO356_12240	0.86	-0.3
2,793,390	+		AO356_12240	0.86	-0.9
2,793,390	+		AO356_12240	0.86	+0.2
2,793,390	+		AO356_12240	0.86	-0.8
2,793,391	-		AO356_12240	0.86	+1.2
2,793,450	+		AO356_12240	0.89	+0.0
2,793,450	+		AO356_12240	0.89	+1.3
2,793,451	-		AO356_12240	0.89	-0.5
2,793,451	-		AO356_12240	0.89	+0.6
2,793,451	-		AO356_12240	0.89	+0.5
2,793,552	+				+0.9
2,793,552	+				-0.6
2,793,552	+				+1.2
2,793,552	+				-0.8
2,793,553	-				-1.1
2,793,553	-				-0.3
2,793,553	-				+0.6
2,793,553	-				-0.0
2,793,553	-				+0.7
2,793,553	-				+0.9
2,793,553	-				-3.8
2,793,606	-				+0.7
2,793,606	-				+0.7
2,793,606	-				+0.5
2,793,606	-				-0.2
2,793,606	-				-0.8
2,793,659	+				-0.3
2,793,660	-				-0.1
2,793,682	+				+1.0
2,793,682	+				+0.9
2,793,682	+				+0.9
2,793,683	-				+0.5
2,793,683	-				+0.2
2,793,683	-				-0.1
2,793,683	-				-0.3
2,793,683	-				-0.9
2,793,683	-				+0.0
2,793,739	+				-1.9
2,793,739	+				-0.8
2,793,739	+				-0.7
2,793,740	-				+1.0
2,793,845	+				+0.0
2,793,846	-				-1.1
2,793,969	+				+0.1
2,793,970	-				+0.3
2,793,970	-				+0.6
2,794,032	-				-0.3
2,794,415	+		AO356_12245	0.22	+0.7
2,794,415	+		AO356_12245	0.22	+0.2
2,794,415	+		AO356_12245	0.22	+0.6
2,794,416	-		AO356_12245	0.22	+1.1
2,794,559	+		AO356_12245	0.27	-0.5
2,794,559	+		AO356_12245	0.27	+0.2
2,794,559	+		AO356_12245	0.27	-0.1
2,794,559	+		AO356_12245	0.27	-2.1
2,794,560	-		AO356_12245	0.28	-0.5
2,794,560	-		AO356_12245	0.28	+1.6
2,794,560	-		AO356_12245	0.28	+0.7