Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_10510

Experiment: Cephalothin 2 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2 mg/ml
2,374,354	-		AO356_10505	0.36	+0.5
2,374,428	+		AO356_10505	0.46	-1.5
2,374,429	-		AO356_10505	0.46	-1.7
2,374,522	+		AO356_10505	0.58	+0.0
2,374,523	-		AO356_10505	0.58	-0.3
2,374,808	+				+0.1
2,374,808	+				-0.5
2,374,808	+				+1.0
2,374,809	-				+0.4
2,374,809	-				-0.4
2,374,809	-				+1.2
2,374,834	+				+0.6
2,374,835	-				-0.0
2,374,835	-				+0.2
2,374,835	-				-0.2
2,374,880	+				-0.7
2,374,881	-				+1.0
2,374,909	+				+0.1
2,374,910	-				+0.0
2,374,957	+				+1.2
2,374,985	+				+1.4
2,374,985	+				+1.6
2,374,985	+				+0.1
2,374,985	+				+0.6
2,374,985	+				+0.7
2,374,985	+				-1.0
2,374,985	+				+0.1
2,374,986	-				+0.8
2,374,986	-				+0.2
2,374,986	-				-0.4
2,374,986	-				-2.2
2,374,986	-				-0.3
2,374,987	+				-0.0
2,374,988	-				+0.5
2,374,993	+				-2.3
2,374,993	+				-1.0
2,374,996	+				+0.3
2,374,996	+				+0.9
2,375,054	+				+1.0
2,375,054	+				-0.5
2,375,054	+				+0.2
2,375,054	+				-0.7
2,375,054	+				+0.2
2,375,054	+				+0.8
2,375,055	-				-0.0
2,375,055	-				+0.2
2,375,055	-				+1.0
2,375,055	-				-0.3
2,375,055	-				-2.3
2,375,102	-				-0.7
2,375,183	+				-2.0
2,375,183	+				+0.7
2,375,184	-				-0.1
2,375,184	-				+1.5
2,375,184	-				-1.0
2,375,184	-				-0.8
2,375,184	-				-0.4
2,375,187	+				-0.5
2,375,187	+				-0.3
2,375,187	+				+1.0
2,375,187	+				-0.3
2,375,187	+				-0.1
2,375,187	+				-0.3
2,375,187	+				+0.6
2,375,188	-				+0.8
2,375,188	-				+0.1
2,375,188	-				+1.1
2,375,202	+				+0.3
2,375,202	+				+0.4
2,375,202	+				+0.6
2,375,202	+				-0.0
2,375,202	+				-0.7
2,375,202	+				-0.0
2,375,220	-				+1.3
2,375,246	-				+0.4
2,375,246	-				-0.3
2,375,257	-				+1.5
2,375,257	-				-0.1
2,375,257	-				-0.8
2,375,257	-				+1.0
2,375,257	-				+1.3
2,375,257	-				-0.3
2,375,352	+				-0.0
2,375,352	+				-0.2
2,375,353	-				-2.7
2,375,353	-				-0.0
2,375,353	-				+0.3
2,375,364	+				-0.2
2,375,413	+		AO356_10510	0.13	+0.2
2,375,413	+		AO356_10510	0.13	+0.1
2,375,413	+		AO356_10510	0.13	-0.3
2,375,413	+		AO356_10510	0.13	+1.2
2,375,413	+		AO356_10510	0.13	-1.4
2,375,414	-		AO356_10510	0.13	+0.6
2,375,414	-		AO356_10510	0.13	+0.6
2,375,414	-		AO356_10510	0.13	-0.9
2,375,414	-		AO356_10510	0.13	+0.5
2,375,414	-		AO356_10510	0.13	-0.2
2,375,414	-		AO356_10510	0.13	-0.8
2,375,425	+		AO356_10510	0.14	-0.1
2,375,425	+		AO356_10510	0.14	+0.0
2,375,425	+		AO356_10510	0.14	-1.3
2,375,426	-		AO356_10510	0.15	+0.1
2,375,426	-		AO356_10510	0.15	+0.9
2,375,426	-		AO356_10510	0.15	+1.8
2,375,426	-		AO356_10510	0.15	-0.0
2,375,469	+		AO356_10510	0.21	-0.7
2,375,470	-		AO356_10510	0.21	-0.9
2,375,538	+		AO356_10510	0.31	-0.7
2,375,538	+		AO356_10510	0.31	+0.3
2,375,539	-		AO356_10510	0.31	+0.3
2,375,539	-		AO356_10510	0.31	+0.1
2,375,539	-		AO356_10510	0.31	+1.2
2,375,539	-		AO356_10510	0.31	+0.6
2,375,539	-		AO356_10510	0.31	-1.6
2,375,539	-		AO356_10510	0.31	-0.0
2,375,572	+		AO356_10510	0.36	+0.1
2,375,572	+		AO356_10510	0.36	+0.4
2,375,572	+		AO356_10510	0.36	+0.4
2,375,573	-		AO356_10510	0.36	-0.0
2,375,660	+		AO356_10510	0.49	-0.0
2,375,696	+		AO356_10510	0.54	+0.3
2,375,696	+		AO356_10510	0.54	-1.8
2,375,696	+		AO356_10510	0.54	+0.3
2,375,697	-		AO356_10510	0.54	-0.0
2,375,697	-		AO356_10510	0.54	-1.5
2,375,697	-		AO356_10510	0.54	-0.0
2,375,712	+		AO356_10510	0.56	+0.6
2,375,712	+		AO356_10510	0.56	-0.3
2,375,712	+		AO356_10510	0.56	-0.6
2,375,712	+		AO356_10510	0.56	+0.5
2,375,713	-		AO356_10510	0.56	+0.3
2,375,713	-		AO356_10510	0.56	-0.1
2,375,713	-		AO356_10510	0.56	+0.1
2,375,713	-		AO356_10510	0.56	+0.5
2,375,713	-		AO356_10510	0.56	+0.9
2,375,713	-		AO356_10510	0.56	-1.0
2,375,756	+		AO356_10510	0.62	+0.7
2,375,813	+		AO356_10510	0.71	+0.4
2,375,813	+		AO356_10510	0.71	+0.9
2,375,826	+		AO356_10510	0.73	-0.5
2,375,827	-		AO356_10510	0.73	+0.0
2,375,827	-		AO356_10510	0.73	-0.2
2,375,851	+		AO356_10510	0.76	+0.8
2,375,851	+		AO356_10510	0.76	+1.0
2,375,851	+		AO356_10510	0.76	+1.1
2,375,851	+		AO356_10510	0.76	-0.7
2,375,851	+		AO356_10510	0.76	+0.5
2,375,851	+		AO356_10510	0.76	+0.1
2,375,851	+		AO356_10510	0.76	-0.7
2,375,851	+		AO356_10510	0.76	+0.1
2,375,852	-		AO356_10510	0.76	+0.5
2,375,852	-		AO356_10510	0.76	+0.6
2,375,852	-		AO356_10510	0.76	+0.5
2,375,874	-		AO356_10510	0.80	+0.1
2,375,896	+		AO356_10510	0.83	+0.6
2,375,897	-		AO356_10510	0.83	-0.7
2,376,006	+				-0.1
2,376,006	+				+1.0
2,376,006	+				-0.6
2,376,006	+				-0.3
2,376,012	+				+1.0
2,376,012	+				-1.0
2,376,012	+				-0.1
2,376,013	-				-1.0
2,376,176	+				+0.7
2,376,176	+				+0.1
2,376,176	+				-0.8
2,376,177	-				+0.4
2,376,254	+		AO356_10515	0.11	+0.1
2,376,255	-		AO356_10515	0.11	-1.3
2,376,437	+		AO356_10515	0.18	+0.4
2,376,438	-		AO356_10515	0.18	+0.1
2,376,438	-		AO356_10515	0.18	+0.3
2,376,440	+		AO356_10515	0.18	+0.2
2,376,440	+		AO356_10515	0.18	-0.6
2,376,440	+		AO356_10515	0.18	-0.8
2,376,440	+		AO356_10515	0.18	+0.7
2,376,440	+		AO356_10515	0.18	-0.8
2,376,441	-		AO356_10515	0.18	-0.0
2,376,441	-		AO356_10515	0.18	+1.1
2,376,597	-		AO356_10515	0.25	+0.6
2,376,683	+		AO356_10515	0.28	+0.4
2,376,683	+		AO356_10515	0.28	-0.8
2,376,683	+		AO356_10515	0.28	+0.1
2,376,683	+		AO356_10515	0.28	-0.3
2,376,683	+		AO356_10515	0.28	+0.1
2,376,683	+		AO356_10515	0.28	+0.5
2,376,683	+		AO356_10515	0.28	+0.9
2,376,683	+		AO356_10515	0.28	-0.5
2,376,683	+		AO356_10515	0.28	+0.3
2,376,684	-		AO356_10515	0.28	+0.3
2,376,684	-		AO356_10515	0.28	-0.1
2,376,684	-		AO356_10515	0.28	+1.6
2,376,684	-		AO356_10515	0.28	+0.3
2,376,684	-		AO356_10515	0.28	-0.4
2,376,896	+		AO356_10515	0.37	-1.7
2,376,897	-		AO356_10515	0.37	+0.3
2,376,897	-		AO356_10515	0.37	-0.2
2,376,956	+		AO356_10515	0.39	-0.7
2,376,956	+		AO356_10515	0.39	-0.2
2,376,956	+		AO356_10515	0.39	+0.5
2,376,956	+		AO356_10515	0.39	+2.4
2,376,956	+		AO356_10515	0.39	+0.6
2,376,957	-		AO356_10515	0.39	-0.4
2,376,957	-		AO356_10515	0.39	-0.1