Strain Fitness in Shewanella loihica PV-4 around Shew_2297
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 2,688,142 | - | Shew_2296 | 0.88 | +0.1 | |
| 2,688,856 | - | +0.8 | |||
| 2,689,312 | - | Shew_2297 | 0.35 | +0.9 | |
| 2,689,422 | + | Shew_2297 | 0.42 | -0.0 | |
| 2,689,877 | + | Shew_2297 | 0.71 | +0.3 | |
| 2,689,883 | - | Shew_2297 | 0.71 | +0.2 | |
| 2,690,018 | - | Shew_2297 | 0.80 | +0.1 | |
| 2,690,582 | + | +0.3 | |||
| 2,690,933 | + | Shew_2298 | 0.23 | +0.1 | |
| 2,690,933 | + | Shew_2298 | 0.23 | +0.2 | |
| 2,691,134 | + | Shew_2298 | 0.33 | +0.9 |
Or see this region's nucleotide sequence