Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0617 and Shew_0618 are separated by 24 nucleotides Shew_0618 and Shew_0619 are separated by 253 nucleotides Shew_0619 and Shew_0620 are separated by 58 nucleotides Shew_0620 and Shew_0621 are separated by 80 nucleotides
Shew_0617: Shew_0617 - phosphate transporter (RefSeq), at 701,995 to 703,263
_0617
Shew_0618: Shew_0618 - hypothetical protein (RefSeq), at 703,288 to 703,968
_0618
Shew_0619: Shew_0619 - adenylate cyclase (RefSeq), at 704,222 to 705,709
_0619
Shew_0620: Shew_0620 - ion transport 2 domain-containing protein (RefSeq), at 705,768 to 706,562
_0620
Shew_0621: Shew_0621 - hypothetical protein (RefSeq), at 706,643 to 706,975
_0621
Position (kb) 704
705
706 Strain fitness (log2 ratio) -1
0
1
2 at 703.311 kb on - strand at 703.420 kb on - strand, within Shew_0618 at 703.524 kb on - strand, within Shew_0618 at 703.888 kb on + strand, within Shew_0618 at 704.030 kb on - strand at 704.030 kb on - strand at 704.273 kb on + strand at 704.295 kb on - strand at 704.303 kb on - strand at 704.373 kb on - strand, within Shew_0619 at 704.680 kb on + strand, within Shew_0619 at 704.883 kb on + strand, within Shew_0619 at 705.084 kb on + strand, within Shew_0619 at 705.136 kb on + strand, within Shew_0619 at 705.240 kb on + strand, within Shew_0619 at 705.300 kb on - strand, within Shew_0619 at 705.327 kb on - strand, within Shew_0619 at 705.328 kb on - strand, within Shew_0619 at 705.520 kb on + strand, within Shew_0619 at 706.222 kb on - strand, within Shew_0620
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 703,311 - -0.2 703,420 - Shew_0618 0.19 +1.8 703,524 - Shew_0618 0.35 +1.5 703,888 + Shew_0618 0.88 +1.1 704,030 - +1.6 704,030 - +1.2 704,273 + +0.9 704,295 - +0.7 704,303 - +0.5 704,373 - Shew_0619 0.10 +0.9 704,680 + Shew_0619 0.31 +1.1 704,883 + Shew_0619 0.44 +0.6 705,084 + Shew_0619 0.58 +0.8 705,136 + Shew_0619 0.61 +0.8 705,240 + Shew_0619 0.68 +0.8 705,300 - Shew_0619 0.72 +0.5 705,327 - Shew_0619 0.74 +0.6 705,328 - Shew_0619 0.74 +0.3 705,520 + Shew_0619 0.87 +0.0 706,222 - Shew_0620 0.57 +0.1
Or see this region's nucleotide sequence