Strain Fitness in Shewanella loihica PV-4 around Shew_0451
Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 501,451 | + | Shew_0450 | 0.36 | +0.1 | |
| 501,459 | - | Shew_0450 | 0.37 | -0.3 | |
| 501,462 | + | Shew_0450 | 0.38 | +0.1 | |
| 502,042 | + | Shew_0451 | 0.24 | +0.1 | |
| 502,225 | + | Shew_0451 | 0.69 | +0.2 | |
| 502,430 | + | +0.1 | |||
| 502,568 | + | Shew_0452 | 0.14 | -0.0 | |
| 502,916 | + | Shew_0452 | 0.50 | -0.3 | |
| 502,934 | + | Shew_0452 | 0.52 | +0.1 | |
| 503,335 | + | +0.2 | |||
| 503,342 | + | +0.2 | |||
| 503,343 | - | -0.1 |
Or see this region's nucleotide sequence