Experiment: bromate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_651 and Pf6N2E2_652 are separated by 172 nucleotides Pf6N2E2_652 and Pf6N2E2_653 overlap by 1 nucleotides
Pf6N2E2_651 - General secretion pathway protein D, at 739,397 to 741,760
_651
Pf6N2E2_652 - General secretion pathway protein E, at 741,933 to 743,351
_652
Pf6N2E2_653 - General secretion pathway protein F, at 743,351 to 744,562
_653
Position (kb) 741
742
743
744 Strain fitness (log2 ratio) -2
-1
0
1
2 at 741.155 kb on + strand, within Pf6N2E2_651 at 741.155 kb on + strand, within Pf6N2E2_651 at 741.155 kb on + strand, within Pf6N2E2_651 at 741.156 kb on - strand, within Pf6N2E2_651 at 741.156 kb on - strand, within Pf6N2E2_651 at 741.156 kb on - strand, within Pf6N2E2_651 at 741.156 kb on - strand, within Pf6N2E2_651 at 741.278 kb on + strand, within Pf6N2E2_651 at 741.278 kb on + strand, within Pf6N2E2_651 at 741.278 kb on + strand, within Pf6N2E2_651 at 741.278 kb on + strand, within Pf6N2E2_651 at 741.279 kb on - strand, within Pf6N2E2_651 at 741.530 kb on + strand at 741.530 kb on + strand at 741.531 kb on - strand at 741.531 kb on - strand at 741.531 kb on - strand at 741.535 kb on + strand at 741.565 kb on + strand at 741.622 kb on + strand at 741.823 kb on + strand at 741.824 kb on - strand at 741.917 kb on + strand at 741.948 kb on + strand at 741.948 kb on + strand at 741.948 kb on + strand at 741.976 kb on + strand at 742.122 kb on + strand, within Pf6N2E2_652 at 742.123 kb on - strand, within Pf6N2E2_652 at 742.701 kb on + strand, within Pf6N2E2_652 at 742.701 kb on + strand, within Pf6N2E2_652 at 742.701 kb on + strand, within Pf6N2E2_652 at 742.702 kb on - strand, within Pf6N2E2_652 at 742.768 kb on - strand, within Pf6N2E2_652 at 742.768 kb on - strand, within Pf6N2E2_652 at 743.811 kb on - strand, within Pf6N2E2_653 at 743.915 kb on + strand, within Pf6N2E2_653 at 743.915 kb on + strand, within Pf6N2E2_653 at 743.915 kb on + strand, within Pf6N2E2_653 at 743.915 kb on + strand, within Pf6N2E2_653 at 743.916 kb on - strand, within Pf6N2E2_653 at 743.916 kb on - strand, within Pf6N2E2_653 at 744.065 kb on - strand, within Pf6N2E2_653 at 744.065 kb on - strand, within Pf6N2E2_653 at 744.068 kb on + strand, within Pf6N2E2_653 at 744.068 kb on + strand, within Pf6N2E2_653 at 744.068 kb on + strand, within Pf6N2E2_653 at 744.069 kb on - strand, within Pf6N2E2_653 at 744.069 kb on - strand, within Pf6N2E2_653 at 744.069 kb on - strand, within Pf6N2E2_653
Per-strain Table
Position Strand Gene LocusTag Fraction bromate 0.05 M remove 741,155 + Pf6N2E2_651 0.74 -1.0 741,155 + Pf6N2E2_651 0.74 +2.6 741,155 + Pf6N2E2_651 0.74 -2.0 741,156 - Pf6N2E2_651 0.74 +0.3 741,156 - Pf6N2E2_651 0.74 -0.6 741,156 - Pf6N2E2_651 0.74 +0.7 741,156 - Pf6N2E2_651 0.74 +1.0 741,278 + Pf6N2E2_651 0.80 +0.4 741,278 + Pf6N2E2_651 0.80 +2.4 741,278 + Pf6N2E2_651 0.80 +0.8 741,278 + Pf6N2E2_651 0.80 -0.0 741,279 - Pf6N2E2_651 0.80 -0.2 741,530 + +0.4 741,530 + +1.2 741,531 - -0.0 741,531 - +1.1 741,531 - -1.2 741,535 + -1.3 741,565 + -0.2 741,622 + -1.3 741,823 + -0.3 741,824 - +1.4 741,917 + -0.2 741,948 + +0.2 741,948 + -1.7 741,948 + +0.5 741,976 + -0.8 742,122 + Pf6N2E2_652 0.13 -0.6 742,123 - Pf6N2E2_652 0.13 -1.6 742,701 + Pf6N2E2_652 0.54 -0.2 742,701 + Pf6N2E2_652 0.54 +0.1 742,701 + Pf6N2E2_652 0.54 -1.7 742,702 - Pf6N2E2_652 0.54 +2.6 742,768 - Pf6N2E2_652 0.59 -0.8 742,768 - Pf6N2E2_652 0.59 -0.1 743,811 - Pf6N2E2_653 0.38 -0.5 743,915 + Pf6N2E2_653 0.47 -0.8 743,915 + Pf6N2E2_653 0.47 -0.2 743,915 + Pf6N2E2_653 0.47 -1.0 743,915 + Pf6N2E2_653 0.47 -1.1 743,916 - Pf6N2E2_653 0.47 -0.6 743,916 - Pf6N2E2_653 0.47 -2.3 744,065 - Pf6N2E2_653 0.59 -2.1 744,065 - Pf6N2E2_653 0.59 +0.1 744,068 + Pf6N2E2_653 0.59 +0.5 744,068 + Pf6N2E2_653 0.59 -0.1 744,068 + Pf6N2E2_653 0.59 -0.8 744,069 - Pf6N2E2_653 0.59 -0.8 744,069 - Pf6N2E2_653 0.59 +0.4 744,069 - Pf6N2E2_653 0.59 +0.7
Or see this region's nucleotide sequence