Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5642

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
6,455,982	-		Pf6N2E2_5641	0.48	-2.0
6,455,982	-		Pf6N2E2_5641	0.48	-0.8
6,455,982	-		Pf6N2E2_5641	0.48	-1.3
6,455,982	-		Pf6N2E2_5641	0.48	-0.1
6,455,982	-		Pf6N2E2_5641	0.48	-1.5
6,456,160	-		Pf6N2E2_5641	0.61	-0.3
6,456,293	+		Pf6N2E2_5641	0.71	-1.6
6,456,294	-		Pf6N2E2_5641	0.71	+1.1
6,456,508	-		Pf6N2E2_5641	0.87	+0.4
6,456,553	+				-0.3
6,456,554	-				-0.6
6,456,554	-				-0.0
6,456,554	-				-1.0
6,456,554	-				+0.2
6,456,554	-				+1.3
6,456,554	-				+2.0
6,456,554	-				-1.3
6,456,554	-				+1.2
6,456,554	-				+1.9
6,456,605	-				+0.9
6,456,643	+				+0.6
6,456,643	+				-0.6
6,456,644	-				+0.6
6,456,715	-				+1.1
6,456,799	+		Pf6N2E2_5642	0.25	-0.5
6,456,799	+		Pf6N2E2_5642	0.25	+0.3
6,456,799	+		Pf6N2E2_5642	0.25	+0.8
6,456,799	+		Pf6N2E2_5642	0.25	-0.6
6,456,799	+		Pf6N2E2_5642	0.25	-1.3
6,456,799	+		Pf6N2E2_5642	0.25	-0.1
6,456,936	-		Pf6N2E2_5642	0.67	-0.9
6,456,985	+		Pf6N2E2_5642	0.82	-0.3
6,456,985	+		Pf6N2E2_5642	0.82	+0.8
6,456,986	-		Pf6N2E2_5642	0.82	-0.6
6,456,986	-		Pf6N2E2_5642	0.82	-0.4
6,456,986	-		Pf6N2E2_5642	0.82	+0.2
6,456,986	-		Pf6N2E2_5642	0.82	-0.4
6,456,986	-		Pf6N2E2_5642	0.82	-2.2
6,456,986	-		Pf6N2E2_5642	0.82	-2.3
6,457,262	+				+0.7
6,457,262	+				-0.5
6,457,262	+				-1.0
6,457,263	-				-0.2
6,457,263	-				-0.8
6,457,263	-				-0.4
6,457,263	-				+1.1
6,457,263	-				+0.4
6,457,263	-				-0.3
6,457,263	-				-0.3
6,457,263	-				-0.6
6,457,263	-				-0.3
6,457,263	-				+0.0
6,457,283	+				+0.7
6,457,283	+				-1.0
6,457,283	+				-0.4
6,457,284	-				+1.0
6,457,311	+		Pf6N2E2_5643	0.16	-0.6
6,457,323	+		Pf6N2E2_5643	0.20	-1.5
6,457,323	+		Pf6N2E2_5643	0.20	-1.0
6,457,324	-		Pf6N2E2_5643	0.20	-0.7
6,457,324	-		Pf6N2E2_5643	0.20	+0.7
6,457,324	-		Pf6N2E2_5643	0.20	-1.0
6,457,324	-		Pf6N2E2_5643	0.20	-0.0
6,457,325	+		Pf6N2E2_5643	0.20	-0.3
6,457,325	+		Pf6N2E2_5643	0.20	-0.4
6,457,326	-		Pf6N2E2_5643	0.21	+0.0
6,457,409	+		Pf6N2E2_5643	0.47	+0.4
6,457,410	-		Pf6N2E2_5643	0.47	-0.6
6,457,514	+		Pf6N2E2_5643	0.80	+0.1
6,457,559	+				+1.0
6,457,559	+				-0.3
6,457,559	+				+0.8
6,457,559	+				+0.0
6,457,562	+				+1.4
6,457,562	+				-0.5
6,457,822	+		Pf6N2E2_5644	0.35	-0.7
6,457,823	-		Pf6N2E2_5644	0.35	+0.9
6,457,823	-		Pf6N2E2_5644	0.35	+0.3
6,457,823	-		Pf6N2E2_5644	0.35	-0.1
6,457,913	+		Pf6N2E2_5644	0.48	+0.2
6,457,914	-		Pf6N2E2_5644	0.48	+0.4