Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5288

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
6,080,425	+		Pf6N2E2_5287	0.71	-0.3
6,080,510	+		Pf6N2E2_5287	0.74	-0.6
6,080,511	-		Pf6N2E2_5287	0.74	-0.5
6,080,656	+		Pf6N2E2_5287	0.80	+0.1
6,080,656	+		Pf6N2E2_5287	0.80	+0.6
6,080,681	-		Pf6N2E2_5287	0.81	-2.3
6,080,970	+				+1.5
6,080,970	+				+1.3
6,080,970	+				-0.1
6,080,971	-				+1.3
6,080,971	-				-0.8
6,080,971	-				-0.0
6,080,971	-				-0.2
6,081,071	+				+0.2
6,081,092	+				-0.4
6,081,092	+				-0.4
6,081,093	-				+1.0
6,081,093	-				+0.4
6,081,093	-				+0.2
6,081,093	-				+0.1
6,081,093	-				-1.4
6,081,096	+				-0.7
6,081,096	+				-0.5
6,081,097	-				+0.5
6,081,097	-				+0.3
6,081,097	-				-1.4
6,081,191	+				+0.6
6,081,202	-				+0.3
6,081,238	+				-1.5
6,081,238	+				-0.2
6,081,239	-				-1.2
6,081,239	-				-0.5
6,081,297	-				-0.7
6,081,434	+		Pf6N2E2_5288	0.20	+1.1
6,081,529	-		Pf6N2E2_5288	0.33	-0.5
6,081,529	-		Pf6N2E2_5288	0.33	-1.6
6,081,529	-		Pf6N2E2_5288	0.33	-1.1
6,081,564	+		Pf6N2E2_5288	0.38	-0.6
6,081,759	+		Pf6N2E2_5288	0.66	-0.8
6,081,832	+		Pf6N2E2_5288	0.76	-0.5
6,081,832	+		Pf6N2E2_5288	0.76	-1.3
6,081,890	+		Pf6N2E2_5288	0.84	-0.4
6,081,890	+		Pf6N2E2_5288	0.84	-2.1
6,081,891	-		Pf6N2E2_5288	0.85	-0.5
6,081,894	+		Pf6N2E2_5288	0.85	-2.0
6,081,894	+		Pf6N2E2_5288	0.85	-1.2
6,081,894	+		Pf6N2E2_5288	0.85	-1.2
6,081,894	+		Pf6N2E2_5288	0.85	-0.3
6,081,894	+		Pf6N2E2_5288	0.85	-1.3
6,081,894	+		Pf6N2E2_5288	0.85	-0.3
6,081,894	+		Pf6N2E2_5288	0.85	+0.3
6,081,894	+		Pf6N2E2_5288	0.85	-2.8
6,081,894	+		Pf6N2E2_5288	0.85	+0.2
6,081,895	-		Pf6N2E2_5288	0.85	-0.7
6,081,895	-		Pf6N2E2_5288	0.85	+0.8
6,081,895	-		Pf6N2E2_5288	0.85	-2.3
6,081,895	-		Pf6N2E2_5288	0.85	-1.6
6,081,895	-		Pf6N2E2_5288	0.85	-0.6
6,081,956	+				+1.1
6,081,956	+				+0.3
6,081,957	-				+0.5
6,081,964	+				+0.7
6,081,964	+				+0.7
6,081,965	-				-2.4
6,081,965	-				-0.9
6,081,965	-				+1.0
6,082,230	+		Pf6N2E2_5289	0.32	+1.2
6,082,230	+		Pf6N2E2_5289	0.32	+0.6
6,082,240	+		Pf6N2E2_5289	0.34	+1.1
6,082,240	+		Pf6N2E2_5289	0.34	-1.1
6,082,241	-		Pf6N2E2_5289	0.34	-0.1
6,082,241	-		Pf6N2E2_5289	0.34	-0.7
6,082,281	+		Pf6N2E2_5289	0.39	-0.5
6,082,281	+		Pf6N2E2_5289	0.39	-0.4
6,082,281	+		Pf6N2E2_5289	0.39	-0.2
6,082,281	+		Pf6N2E2_5289	0.39	-0.2
6,082,281	+		Pf6N2E2_5289	0.39	-0.0
6,082,282	-		Pf6N2E2_5289	0.39	+0.1
6,082,282	-		Pf6N2E2_5289	0.39	-0.9
6,082,282	-		Pf6N2E2_5289	0.39	-0.5
6,082,324	+		Pf6N2E2_5289	0.44	+0.2
6,082,324	+		Pf6N2E2_5289	0.44	-3.0
6,082,324	+		Pf6N2E2_5289	0.44	-0.3
6,082,325	-		Pf6N2E2_5289	0.44	-0.7
6,082,335	+		Pf6N2E2_5289	0.45	+0.3
6,082,335	+		Pf6N2E2_5289	0.45	-0.4
6,082,335	+		Pf6N2E2_5289	0.45	-2.0
6,082,369	-		Pf6N2E2_5289	0.49	+0.8
6,082,548	+		Pf6N2E2_5289	0.71	+0.8
6,082,548	+		Pf6N2E2_5289	0.71	-0.5
6,082,819	+				-1.1
6,082,819	+				-2.1
6,082,821	+				+0.9
6,082,821	+				+0.5
6,082,821	+				-0.4
6,082,821	+				-0.4
6,082,821	+				-1.4
6,082,821	+				+0.9
6,082,821	+				+0.6
6,082,822	-				+0.6
6,082,822	-				+1.2
6,082,848	+				-2.1
6,082,848	+				-0.3
6,082,849	-				+0.5
6,082,859	+				+2.6
6,082,970	-				-0.9