Experiment: bromate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_339 and Pf6N2E2_340 are separated by 1 nucleotides Pf6N2E2_340 and Pf6N2E2_341 are separated by 177 nucleotides Pf6N2E2_341 and Pf6N2E2_342 overlap by 4 nucleotides
Pf6N2E2_339 - Glutathione-regulated potassium-efflux system protein KefC, at 405,517 to 407,343
_339
Pf6N2E2_340 - Glutathione-regulated potassium-efflux system ancillary protein KefF, at 407,345 to 407,866
_340
Pf6N2E2_341 - sensor histidine kinase, at 408,044 to 409,390
_341
Pf6N2E2_342 - DNA-binding response regulator, at 409,387 to 410,097
_342
Position (kb) 408
409
410 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 407.188 kb on + strand at 407.189 kb on - strand at 407.189 kb on - strand at 407.239 kb on + strand at 407.240 kb on - strand at 407.240 kb on - strand at 407.240 kb on - strand at 407.240 kb on - strand at 407.240 kb on - strand at 407.243 kb on + strand at 407.244 kb on - strand at 407.309 kb on + strand at 407.309 kb on + strand at 407.309 kb on + strand at 407.310 kb on - strand at 407.310 kb on - strand at 407.310 kb on - strand at 407.379 kb on + strand at 407.379 kb on + strand at 407.380 kb on - strand at 407.380 kb on - strand at 407.380 kb on - strand at 407.380 kb on - strand at 407.380 kb on - strand at 407.421 kb on + strand, within Pf6N2E2_340 at 407.421 kb on + strand, within Pf6N2E2_340 at 407.466 kb on + strand, within Pf6N2E2_340 at 407.466 kb on + strand, within Pf6N2E2_340 at 407.466 kb on + strand, within Pf6N2E2_340 at 407.664 kb on + strand, within Pf6N2E2_340 at 407.670 kb on + strand, within Pf6N2E2_340 at 407.670 kb on + strand, within Pf6N2E2_340 at 407.670 kb on + strand, within Pf6N2E2_340 at 407.752 kb on - strand, within Pf6N2E2_340 at 407.760 kb on + strand, within Pf6N2E2_340 at 407.771 kb on + strand, within Pf6N2E2_340 at 407.771 kb on + strand, within Pf6N2E2_340 at 407.771 kb on + strand, within Pf6N2E2_340 at 407.772 kb on - strand, within Pf6N2E2_340 at 407.772 kb on - strand, within Pf6N2E2_340 at 407.772 kb on - strand, within Pf6N2E2_340 at 407.838 kb on + strand at 407.838 kb on + strand at 407.850 kb on + strand at 407.851 kb on - strand at 407.851 kb on - strand at 407.940 kb on + strand at 408.018 kb on + strand at 408.316 kb on - strand, within Pf6N2E2_341 at 408.316 kb on - strand, within Pf6N2E2_341 at 408.316 kb on - strand, within Pf6N2E2_341 at 408.378 kb on + strand, within Pf6N2E2_341 at 408.378 kb on + strand, within Pf6N2E2_341 at 408.668 kb on + strand, within Pf6N2E2_341 at 409.011 kb on + strand, within Pf6N2E2_341 at 409.012 kb on - strand, within Pf6N2E2_341 at 409.805 kb on + strand, within Pf6N2E2_342 at 410.086 kb on + strand at 410.087 kb on - strand at 410.087 kb on - strand at 410.087 kb on - strand at 410.120 kb on + strand at 410.121 kb on - strand at 410.135 kb on + strand at 410.135 kb on + strand at 410.135 kb on + strand at 410.136 kb on - strand at 410.160 kb on + strand at 410.161 kb on - strand at 410.162 kb on + strand at 410.162 kb on + strand at 410.162 kb on + strand at 410.163 kb on - strand at 410.178 kb on + strand at 410.179 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction bromate 0.05 M remove 407,188 + -1.2 407,189 - +0.0 407,189 - -0.3 407,239 + +1.2 407,240 - -1.0 407,240 - +0.1 407,240 - -0.1 407,240 - +0.9 407,240 - -1.2 407,243 + +1.7 407,244 - +0.1 407,309 + +0.7 407,309 + -0.7 407,309 + -3.2 407,310 - -0.6 407,310 - +0.8 407,310 - -0.4 407,379 + +0.1 407,379 + +0.9 407,380 - +0.3 407,380 - -0.7 407,380 - +0.4 407,380 - -0.4 407,380 - +1.1 407,421 + Pf6N2E2_340 0.15 -0.5 407,421 + Pf6N2E2_340 0.15 +0.3 407,466 + Pf6N2E2_340 0.23 -1.7 407,466 + Pf6N2E2_340 0.23 -0.7 407,466 + Pf6N2E2_340 0.23 -0.5 407,664 + Pf6N2E2_340 0.61 +0.7 407,670 + Pf6N2E2_340 0.62 +1.7 407,670 + Pf6N2E2_340 0.62 +0.2 407,670 + Pf6N2E2_340 0.62 +0.6 407,752 - Pf6N2E2_340 0.78 +0.5 407,760 + Pf6N2E2_340 0.80 +1.0 407,771 + Pf6N2E2_340 0.82 +0.3 407,771 + Pf6N2E2_340 0.82 -0.3 407,771 + Pf6N2E2_340 0.82 -0.5 407,772 - Pf6N2E2_340 0.82 +0.3 407,772 - Pf6N2E2_340 0.82 +2.4 407,772 - Pf6N2E2_340 0.82 -2.2 407,838 + -0.6 407,838 + -1.3 407,850 + +0.3 407,851 - -1.2 407,851 - +0.5 407,940 + +0.3 408,018 + -1.0 408,316 - Pf6N2E2_341 0.20 -0.7 408,316 - Pf6N2E2_341 0.20 +2.1 408,316 - Pf6N2E2_341 0.20 -0.4 408,378 + Pf6N2E2_341 0.25 -0.7 408,378 + Pf6N2E2_341 0.25 -1.1 408,668 + Pf6N2E2_341 0.46 -1.4 409,011 + Pf6N2E2_341 0.72 -0.2 409,012 - Pf6N2E2_341 0.72 -1.8 409,805 + Pf6N2E2_342 0.59 +0.0 410,086 + -1.7 410,087 - +0.8 410,087 - -0.8 410,087 - -0.6 410,120 + +1.2 410,121 - +0.3 410,135 + +1.2 410,135 + +0.8 410,135 + +0.3 410,136 - -0.2 410,160 + -1.6 410,161 - +2.1 410,162 + -0.5 410,162 + -0.8 410,162 + -0.7 410,163 - +0.1 410,178 + -0.4 410,179 - +0.3
Or see this region's nucleotide sequence