Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3348

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
3,875,519	+				-1.8
3,875,519	+				+0.1
3,875,519	+				+0.1
3,875,519	+				-3.0
3,875,519	+				-0.2
3,875,519	+				+0.5
3,875,519	+				+1.5
3,875,520	-				+0.4
3,875,520	-				-0.6
3,875,520	-				+2.9
3,875,520	-				-0.5
3,875,520	-				+1.9
3,875,520	-				+0.7
3,875,520	-				-0.3
3,875,520	-				+0.4
3,875,520	-				+1.7
3,875,581	+				+0.6
3,875,687	+				+1.3
3,875,687	+				+0.5
3,875,688	-				-0.5
3,875,688	-				-0.9
3,875,688	-				+0.9
3,875,688	-				+0.4
3,875,688	-				-1.5
3,875,692	+				-1.1
3,875,701	-				+2.7
3,875,701	-				-2.4
3,875,701	-				-0.6
3,875,714	+				+0.8
3,875,715	-				+0.8
3,875,801	+		Pf6N2E2_3347	0.38	+0.0
3,875,801	+		Pf6N2E2_3347	0.38	+0.4
3,875,802	-		Pf6N2E2_3347	0.38	-2.0
3,875,802	-		Pf6N2E2_3347	0.38	+0.9
3,875,932	+		Pf6N2E2_3347	0.80	+0.7
3,875,932	+		Pf6N2E2_3347	0.80	+0.6
3,875,932	+		Pf6N2E2_3347	0.80	-0.3
3,875,933	-		Pf6N2E2_3347	0.81	+1.7
3,875,933	-		Pf6N2E2_3347	0.81	-0.6
3,875,933	-		Pf6N2E2_3347	0.81	+1.0
3,875,936	+		Pf6N2E2_3347	0.82	-0.4
3,875,936	+		Pf6N2E2_3347	0.82	-0.5
3,875,937	-		Pf6N2E2_3347	0.82	-0.7
3,876,077	+				-2.9
3,876,078	-				+0.0
3,876,145	+				-0.1
3,876,145	+				+0.5
3,876,146	-				-0.3
3,876,146	-				+1.1
3,876,146	-				+0.9
3,876,146	-				+0.0
3,876,146	-				+0.4
3,876,146	-				+0.7
3,876,147	+				-0.0
3,876,147	+				+0.4
3,876,148	-				-0.9
3,876,148	-				-1.1
3,876,169	-				+1.1
3,876,180	+				+0.1
3,876,180	+				-0.6
3,876,180	+				-0.2
3,876,180	+				-1.1
3,876,180	+				-0.1
3,876,180	+				-0.1
3,876,180	+				-0.2
3,876,180	+				-0.7
3,876,180	+				-1.0
3,876,181	-				-0.3
3,876,181	-				-0.1
3,876,181	-				+0.6
3,876,181	-				+0.8
3,876,181	-				+0.4
3,876,181	-				+0.7
3,876,186	+				-1.7
3,876,186	+				-0.1
3,876,186	+				-1.0
3,876,186	+				+0.2
3,876,187	-				-0.1
3,876,187	-				+1.1
3,876,187	-				+1.4
3,876,187	-				+1.0
3,876,209	-				-0.0
3,876,417	+		Pf6N2E2_3348	0.22	+0.7
3,876,417	+		Pf6N2E2_3348	0.22	-1.7
3,876,429	-		Pf6N2E2_3348	0.24	-1.8
3,876,445	-		Pf6N2E2_3348	0.27	+0.3
3,876,462	+		Pf6N2E2_3348	0.30	-0.0
3,876,462	+		Pf6N2E2_3348	0.30	-1.6
3,876,462	+		Pf6N2E2_3348	0.30	-0.2
3,876,462	+		Pf6N2E2_3348	0.30	+1.1
3,876,462	+		Pf6N2E2_3348	0.30	-1.6
3,876,462	+		Pf6N2E2_3348	0.30	-0.8
3,876,463	-		Pf6N2E2_3348	0.30	+0.4
3,876,463	-		Pf6N2E2_3348	0.30	-0.8
3,876,463	-		Pf6N2E2_3348	0.30	-1.3
3,876,463	-		Pf6N2E2_3348	0.30	-0.3
3,876,463	-		Pf6N2E2_3348	0.30	-0.6
3,876,844	-				+0.8
3,876,844	-				+0.5
3,876,923	+		Pf6N2E2_6117	0.88	+1.2
3,876,924	-				-0.0
3,876,944	+				-0.1
3,876,944	+				+0.7
3,876,944	+				+0.4
3,876,945	-				-1.1
3,876,945	-				+0.5
3,876,996	+				+0.2
3,876,996	+				-0.1
3,876,997	-				+1.3
3,876,997	-				+0.2
3,876,997	-				-1.8
3,877,286	+		Pf6N2E2_3349	0.11	-0.6
3,877,286	+		Pf6N2E2_3349	0.11	-0.8
3,877,286	+		Pf6N2E2_3349	0.11	+2.0
3,877,287	-		Pf6N2E2_3349	0.11	+1.1
3,877,287	-		Pf6N2E2_3349	0.11	-0.3