Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2861

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
3,350,157	+		Pf6N2E2_2859	0.55	+0.2
3,350,157	+		Pf6N2E2_2859	0.55	+0.6
3,350,158	-		Pf6N2E2_2859	0.55	+1.6
3,350,199	+		Pf6N2E2_2859	0.63	+0.1
3,350,200	-		Pf6N2E2_2859	0.64	-0.4
3,350,200	-		Pf6N2E2_2859	0.64	-0.7
3,350,200	-		Pf6N2E2_2859	0.64	-1.7
3,350,200	-		Pf6N2E2_2859	0.64	-1.2
3,350,314	+		Pf6N2E2_2859	0.87	-0.3
3,350,355	+				+0.7
3,350,420	+				+0.8
3,350,420	+				+0.1
3,350,420	+				+0.5
3,350,421	-				+0.4
3,350,421	-				-0.3
3,350,421	-				+0.1
3,350,421	-				-0.6
3,350,421	-				-0.2
3,350,421	-				-0.6
3,350,494	+				-1.3
3,350,526	-		Pf6N2E2_2860	0.10	+0.4
3,350,712	+		Pf6N2E2_2860	0.38	+0.4
3,350,713	-		Pf6N2E2_2860	0.38	+0.4
3,350,718	+		Pf6N2E2_2860	0.39	+1.0
3,350,847	-		Pf6N2E2_2860	0.59	-1.0
3,350,879	+		Pf6N2E2_2860	0.63	+1.4
3,350,879	+		Pf6N2E2_2860	0.63	-2.9
3,350,880	-		Pf6N2E2_2860	0.64	-1.6
3,350,930	+		Pf6N2E2_2860	0.71	-1.6
3,350,931	-		Pf6N2E2_2860	0.71	+0.5
3,350,973	-		Pf6N2E2_2860	0.78	-3.0
3,351,070	+				-0.1
3,351,070	+				-0.3
3,351,070	+				+1.0
3,351,071	-				+1.2
3,351,071	-				-0.4
3,351,071	-				-0.1
3,351,121	+				+0.6
3,351,122	-				-0.5
3,351,143	+				-0.3
3,351,213	+		Pf6N2E2_2861	0.32	-0.1
3,351,255	-		Pf6N2E2_2861	0.54	-1.3
3,351,315	+		Pf6N2E2_2861	0.86	+0.4
3,351,315	+		Pf6N2E2_2861	0.86	+0.1
3,351,315	+		Pf6N2E2_2861	0.86	-1.6
3,351,316	-		Pf6N2E2_2861	0.86	-0.6
3,351,316	-		Pf6N2E2_2861	0.86	-1.5
3,351,316	-		Pf6N2E2_2861	0.86	-1.1
3,351,316	-		Pf6N2E2_2861	0.86	+0.9
3,351,316	-		Pf6N2E2_2861	0.86	-0.3
3,351,384	+				-0.7
3,351,385	-				-0.9
3,351,388	+				+0.4
3,351,388	+				+0.5
3,351,388	+				+0.5
3,351,389	-				-0.9
3,351,389	-				+2.9
3,351,389	-				+0.4
3,351,396	-				+0.6
3,351,589	-		Pf6N2E2_2862	0.21	-0.7
3,351,601	-		Pf6N2E2_2862	0.22	-0.0
3,351,601	-		Pf6N2E2_2862	0.22	-0.9
3,351,738	+		Pf6N2E2_2862	0.33	+0.6
3,351,739	-		Pf6N2E2_2862	0.34	+0.9
3,351,739	-		Pf6N2E2_2862	0.34	+0.1
3,351,739	-		Pf6N2E2_2862	0.34	+0.1
3,351,936	+		Pf6N2E2_2862	0.50	-1.4
3,351,937	-		Pf6N2E2_2862	0.50	+1.3
3,352,065	+		Pf6N2E2_2862	0.60	-1.4
3,352,065	+		Pf6N2E2_2862	0.60	+1.4
3,352,066	-		Pf6N2E2_2862	0.60	-0.7
3,352,066	-		Pf6N2E2_2862	0.60	+1.2
3,352,143	+		Pf6N2E2_2862	0.67	+1.1
3,352,143	+		Pf6N2E2_2862	0.67	-0.4
3,352,143	+		Pf6N2E2_2862	0.67	-0.1
3,352,144	-		Pf6N2E2_2862	0.67	+0.4
3,352,152	+		Pf6N2E2_2862	0.67	+1.7
3,352,255	+		Pf6N2E2_2862	0.76	+0.8
3,352,314	+		Pf6N2E2_2862	0.81	-1.1
3,352,314	+		Pf6N2E2_2862	0.81	+0.4
3,352,314	+		Pf6N2E2_2862	0.81	-0.6
3,352,314	+		Pf6N2E2_2862	0.81	-0.8
3,352,314	+		Pf6N2E2_2862	0.81	+1.1
3,352,314	+		Pf6N2E2_2862	0.81	+1.2
3,352,314	+		Pf6N2E2_2862	0.81	+1.3
3,352,315	-		Pf6N2E2_2862	0.81	+2.0
3,352,341	+		Pf6N2E2_2862	0.83	+0.1
3,352,341	+		Pf6N2E2_2862	0.83	+1.3
3,352,341	+		Pf6N2E2_2862	0.83	-2.1