Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2847

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
3,336,804	+		Pf6N2E2_2846	0.13	+0.4
3,336,804	+		Pf6N2E2_2846	0.13	-0.8
3,336,805	-		Pf6N2E2_2846	0.13	+1.5
3,336,805	-		Pf6N2E2_2846	0.13	+0.0
3,336,928	-		Pf6N2E2_2846	0.27	-0.8
3,336,928	-		Pf6N2E2_2846	0.27	+0.1
3,336,960	+		Pf6N2E2_2846	0.31	+0.5
3,336,960	+		Pf6N2E2_2846	0.31	-1.5
3,336,960	+		Pf6N2E2_2846	0.31	+0.3
3,336,960	+		Pf6N2E2_2846	0.31	+0.1
3,336,961	-		Pf6N2E2_2846	0.31	+0.3
3,336,961	-		Pf6N2E2_2846	0.31	-1.2
3,336,961	-		Pf6N2E2_2846	0.31	+0.7
3,336,961	-		Pf6N2E2_2846	0.31	+1.1
3,336,979	-		Pf6N2E2_2846	0.33	-1.1
3,336,979	-		Pf6N2E2_2846	0.33	-0.3
3,336,997	+		Pf6N2E2_2846	0.35	-1.7
3,337,093	-		Pf6N2E2_2846	0.47	+0.5
3,337,093	-		Pf6N2E2_2846	0.47	+1.4
3,337,095	+		Pf6N2E2_2846	0.47	-0.6
3,337,096	-		Pf6N2E2_2846	0.47	+0.5
3,337,134	+		Pf6N2E2_2846	0.52	+0.3
3,337,134	+		Pf6N2E2_2846	0.52	+0.2
3,337,134	+		Pf6N2E2_2846	0.52	+0.0
3,337,135	-		Pf6N2E2_2846	0.52	-2.4
3,337,135	-		Pf6N2E2_2846	0.52	+1.0
3,337,182	+		Pf6N2E2_2846	0.57	+0.8
3,337,183	-		Pf6N2E2_2846	0.58	+0.2
3,337,340	+		Pf6N2E2_2846	0.76	+2.2
3,337,340	+		Pf6N2E2_2846	0.76	-0.7
3,337,341	-		Pf6N2E2_2846	0.76	+0.5
3,337,341	-		Pf6N2E2_2846	0.76	-0.1
3,337,341	-		Pf6N2E2_2846	0.76	-0.2
3,337,344	+		Pf6N2E2_2846	0.77	-0.1
3,337,345	-		Pf6N2E2_2846	0.77	+0.0
3,337,345	-		Pf6N2E2_2846	0.77	-1.8
3,337,345	-		Pf6N2E2_2846	0.77	-1.7
3,337,413	+		Pf6N2E2_2846	0.85	+0.0
3,337,414	-		Pf6N2E2_2846	0.85	+0.6
3,337,416	+		Pf6N2E2_2846	0.85	-0.6
3,337,416	+		Pf6N2E2_2846	0.85	-0.3
3,337,416	+		Pf6N2E2_2846	0.85	-1.5
3,337,416	+		Pf6N2E2_2846	0.85	-0.7
3,337,417	-		Pf6N2E2_2846	0.85	+0.5
3,337,417	-		Pf6N2E2_2846	0.85	+0.8
3,337,540	+				+1.2
3,337,578	+				-0.3
3,337,579	-				+1.0
3,337,603	+				-0.5
3,337,603	+				+0.1
3,337,603	+				-0.1
3,337,603	+				+0.3
3,337,604	-				-0.2
3,337,604	-				-0.2
3,337,604	-				+0.8
3,337,649	-				+2.0
3,337,730	-				+1.3
3,337,778	+				-0.3
3,337,778	+				+0.2
3,337,779	-				+0.6
3,337,843	-				-1.8
3,338,043	+		Pf6N2E2_2847	0.30	+0.8
3,338,044	-		Pf6N2E2_2847	0.30	-0.4
3,338,044	-		Pf6N2E2_2847	0.30	-0.4
3,338,184	+		Pf6N2E2_2847	0.46	+0.4
3,338,184	+		Pf6N2E2_2847	0.46	+1.2
3,338,184	+		Pf6N2E2_2847	0.46	+0.3
3,338,185	-		Pf6N2E2_2847	0.47	-1.2
3,338,185	-		Pf6N2E2_2847	0.47	-1.2
3,338,199	+		Pf6N2E2_2847	0.48	-1.2
3,338,199	+		Pf6N2E2_2847	0.48	-1.9
3,338,199	+		Pf6N2E2_2847	0.48	+0.6
3,338,199	+		Pf6N2E2_2847	0.48	+0.1
3,338,200	-		Pf6N2E2_2847	0.48	-1.7
3,338,200	-		Pf6N2E2_2847	0.48	-0.7
3,338,200	-		Pf6N2E2_2847	0.48	+0.6
3,338,200	-		Pf6N2E2_2847	0.48	-0.9
3,338,201	+		Pf6N2E2_2847	0.48	+1.7
3,338,201	+		Pf6N2E2_2847	0.48	-1.8
3,338,201	+		Pf6N2E2_2847	0.48	+0.2
3,338,201	+		Pf6N2E2_2847	0.48	-0.3
3,338,201	+		Pf6N2E2_2847	0.48	-1.5
3,338,202	-		Pf6N2E2_2847	0.49	+0.5
3,338,202	-		Pf6N2E2_2847	0.49	-1.7
3,338,202	-		Pf6N2E2_2847	0.49	+0.1
3,338,202	-		Pf6N2E2_2847	0.49	+2.4
3,338,202	-		Pf6N2E2_2847	0.49	+0.3
3,338,202	-		Pf6N2E2_2847	0.49	-0.8
3,338,611	+				+1.7
3,338,611	+				+0.2
3,338,611	+				-1.2
3,338,612	-				-1.0
3,338,695	+				+0.1
3,338,695	+				-0.2
3,338,696	-				-1.3
3,338,696	-				+0.2
3,338,696	-				+0.7
3,338,696	-				-1.9
3,338,697	+				+0.5
3,338,698	-				-0.3
3,338,698	-				+1.4
3,338,782	+				-0.9
3,338,782	+				+0.8
3,338,783	-				-0.8
3,338,783	-				-2.2
3,338,783	-				+0.5
3,338,783	-				+1.9
3,338,788	+				+1.4
3,338,806	+				+0.6
3,338,806	+				+0.4
3,338,806	+				-0.3
3,338,806	+				-1.8
3,338,806	+				+0.2
3,338,807	-				+0.3
3,338,807	-				-0.3
3,338,864	+				+1.7
3,338,864	+				+0.2
3,338,864	+				-1.4
3,338,865	-				-1.2
3,338,865	-				+1.9
3,338,874	-				+0.2
3,339,000	+		Pf6N2E2_2848	0.21	-1.7
3,339,000	+		Pf6N2E2_2848	0.21	-1.4
3,339,001	-		Pf6N2E2_2848	0.21	-1.0
3,339,001	-		Pf6N2E2_2848	0.21	-1.3
3,339,001	-		Pf6N2E2_2848	0.21	-0.7
3,339,001	-		Pf6N2E2_2848	0.21	+0.3
3,339,001	-		Pf6N2E2_2848	0.21	+0.2
3,339,001	-		Pf6N2E2_2848	0.21	-1.7
3,339,002	+		Pf6N2E2_2848	0.21	-1.7
3,339,002	+		Pf6N2E2_2848	0.21	-0.9
3,339,002	+		Pf6N2E2_2848	0.21	+0.7
3,339,002	+		Pf6N2E2_2848	0.21	-0.1
3,339,002	+		Pf6N2E2_2848	0.21	+0.0
3,339,003	-		Pf6N2E2_2848	0.21	-0.2
3,339,003	-		Pf6N2E2_2848	0.21	-0.6
3,339,003	-		Pf6N2E2_2848	0.21	+1.3
3,339,015	-		Pf6N2E2_2848	0.23	-0.8
3,339,062	+		Pf6N2E2_2848	0.27	-1.9
3,339,062	+		Pf6N2E2_2848	0.27	-0.3
3,339,062	+		Pf6N2E2_2848	0.27	+0.0
3,339,062	+		Pf6N2E2_2848	0.27	-1.2
3,339,062	+		Pf6N2E2_2848	0.27	-1.6
3,339,062	+		Pf6N2E2_2848	0.27	+2.0
3,339,063	-		Pf6N2E2_2848	0.27	-1.2
3,339,063	-		Pf6N2E2_2848	0.27	+0.5
3,339,063	-		Pf6N2E2_2848	0.27	+0.7
3,339,063	-		Pf6N2E2_2848	0.27	-0.4
3,339,063	-		Pf6N2E2_2848	0.27	+0.1
3,339,063	-		Pf6N2E2_2848	0.27	+0.6
3,339,063	-		Pf6N2E2_2848	0.27	-0.1
3,339,063	-		Pf6N2E2_2848	0.27	+0.4
3,339,063	-		Pf6N2E2_2848	0.27	+0.6
3,339,108	+		Pf6N2E2_2848	0.32	+3.7
3,339,108	+		Pf6N2E2_2848	0.32	+0.4
3,339,108	+		Pf6N2E2_2848	0.32	-2.1
3,339,108	+		Pf6N2E2_2848	0.32	-0.5
3,339,109	-		Pf6N2E2_2848	0.32	-0.2
3,339,109	-		Pf6N2E2_2848	0.32	+1.9
3,339,109	-		Pf6N2E2_2848	0.32	+0.7
3,339,110	+		Pf6N2E2_2848	0.32	+0.5
3,339,110	+		Pf6N2E2_2848	0.32	+0.7
3,339,110	+		Pf6N2E2_2848	0.32	+0.2
3,339,110	+		Pf6N2E2_2848	0.32	+1.2
3,339,110	+		Pf6N2E2_2848	0.32	+0.6
3,339,110	+		Pf6N2E2_2848	0.32	-0.3
3,339,111	-		Pf6N2E2_2848	0.32	+1.5
3,339,111	-		Pf6N2E2_2848	0.32	-0.1
3,339,111	-		Pf6N2E2_2848	0.32	+1.8
3,339,356	+		Pf6N2E2_2848	0.57	-0.7
3,339,357	-		Pf6N2E2_2848	0.57	+0.1
3,339,437	+		Pf6N2E2_2848	0.65	+1.7
3,339,437	+		Pf6N2E2_2848	0.65	+2.1
3,339,437	+		Pf6N2E2_2848	0.65	-0.8
3,339,438	-		Pf6N2E2_2848	0.65	-0.9
3,339,438	-		Pf6N2E2_2848	0.65	+0.2