Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1608

Experiment: bromate 0.05 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	bromate 0.05 M
1,880,447	+		Pf6N2E2_1607	0.52	+0.9
1,880,448	-		Pf6N2E2_1607	0.52	+0.4
1,880,448	-		Pf6N2E2_1607	0.52	-2.1
1,880,527	+		Pf6N2E2_1607	0.60	-0.8
1,880,528	-		Pf6N2E2_1607	0.60	-0.8
1,880,897	+				-1.6
1,880,950	+				-1.4
1,880,951	-				-0.3
1,880,951	-				-0.8
1,880,951	-				-1.0
1,880,976	+				-0.7
1,880,976	+				-0.2
1,881,071	+				-1.9
1,881,179	+				-1.3
1,881,322	+				-0.4
1,881,323	-				+0.7
1,881,323	-				+1.4
1,881,323	-				-0.8
1,881,323	-				+0.6
1,881,323	-				-0.1
1,881,438	+				-1.4
1,881,438	+				+0.7
1,881,438	+				-0.7
1,881,439	-				-0.7
1,881,439	-				-0.9
1,881,494	+				-0.1
1,881,644	+		Pf6N2E2_1608	0.18	-0.1
1,881,644	+		Pf6N2E2_1608	0.18	+0.2
1,881,644	+		Pf6N2E2_1608	0.18	+1.3
1,881,644	+		Pf6N2E2_1608	0.18	-0.0
1,881,644	+		Pf6N2E2_1608	0.18	-1.8
1,881,645	-		Pf6N2E2_1608	0.18	+0.8
1,881,645	-		Pf6N2E2_1608	0.18	-0.8
1,881,645	-		Pf6N2E2_1608	0.18	+0.5
1,881,647	-		Pf6N2E2_1608	0.18	-0.7
1,881,647	-		Pf6N2E2_1608	0.18	+0.6
1,882,073	+		Pf6N2E2_1608	0.44	-2.5
1,882,094	-		Pf6N2E2_1608	0.46	-1.3
1,882,362	-		Pf6N2E2_1608	0.62	+0.7
1,882,362	-		Pf6N2E2_1608	0.62	-0.4
1,882,362	-		Pf6N2E2_1608	0.62	-0.7
1,882,502	+		Pf6N2E2_1608	0.71	-0.1
1,882,502	+		Pf6N2E2_1608	0.71	+0.5
1,882,502	+		Pf6N2E2_1608	0.71	+0.6
1,882,502	+		Pf6N2E2_1608	0.71	+0.7
1,882,503	-		Pf6N2E2_1608	0.71	+0.2
1,882,503	-		Pf6N2E2_1608	0.71	+0.4
1,882,503	-		Pf6N2E2_1608	0.71	-0.1
1,882,733	+		Pf6N2E2_1608	0.85	-0.4
1,882,734	-		Pf6N2E2_1608	0.85	-1.1
1,882,908	+				-1.7
1,882,950	-				-0.7
1,882,950	-				-0.4
1,883,061	+				-1.9
1,883,246	-				+0.4
1,883,263	-				+0.1
1,883,390	+				+0.1
1,883,391	-				-1.9
1,883,490	+		Pf6N2E2_1609	0.17	+0.6
1,883,491	-		Pf6N2E2_1609	0.17	-0.4
1,883,651	-		Pf6N2E2_1609	0.36	+0.2
1,883,651	-		Pf6N2E2_1609	0.36	+0.4
1,883,776	+		Pf6N2E2_1609	0.51	+0.6
1,883,777	-		Pf6N2E2_1609	0.51	+1.4
1,883,788	-		Pf6N2E2_1609	0.52	-2.2
1,883,823	+		Pf6N2E2_1609	0.56	-1.7
1,883,823	+		Pf6N2E2_1609	0.56	-1.4
1,883,823	+		Pf6N2E2_1609	0.56	-0.6
1,883,824	-		Pf6N2E2_1609	0.56	+0.2
1,883,824	-		Pf6N2E2_1609	0.56	-0.3