Experiment: bromate 0.05 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_14 and Pf6N2E2_15 are separated by 201 nucleotides Pf6N2E2_15 and Pf6N2E2_16 are separated by 202 nucleotides
Pf6N2E2_14 - Putative dipeptidase, pyoverdin biosynthesis PvdM, at 43,210 to 44,580
_14
Pf6N2E2_15 - Pyoverdine biosynthesis related protein PvdP, at 44,782 to 46,380
_15
Pf6N2E2_16 - hypothetical protein, at 46,583 to 46,909
_16
Position (kb) 44
45
46
47 Strain fitness (log2 ratio) -2
-1
0
1 at 43.803 kb on + strand, within Pf6N2E2_14 at 43.991 kb on + strand, within Pf6N2E2_14 at 43.992 kb on - strand, within Pf6N2E2_14 at 43.992 kb on - strand, within Pf6N2E2_14 at 43.992 kb on - strand, within Pf6N2E2_14 at 44.135 kb on + strand, within Pf6N2E2_14 at 44.135 kb on + strand, within Pf6N2E2_14 at 44.235 kb on + strand, within Pf6N2E2_14 at 44.236 kb on - strand, within Pf6N2E2_14 at 44.633 kb on - strand at 44.686 kb on + strand at 44.688 kb on + strand at 44.689 kb on - strand at 44.714 kb on + strand at 44.751 kb on + strand at 44.751 kb on + strand at 44.751 kb on + strand at 44.824 kb on + strand at 44.824 kb on + strand at 44.824 kb on + strand at 44.827 kb on + strand at 44.828 kb on - strand at 45.044 kb on - strand, within Pf6N2E2_15 at 45.179 kb on - strand, within Pf6N2E2_15 at 45.179 kb on - strand, within Pf6N2E2_15 at 45.342 kb on + strand, within Pf6N2E2_15 at 45.342 kb on + strand, within Pf6N2E2_15 at 45.736 kb on + strand, within Pf6N2E2_15 at 45.775 kb on + strand, within Pf6N2E2_15 at 45.776 kb on - strand, within Pf6N2E2_15 at 45.776 kb on - strand, within Pf6N2E2_15 at 45.979 kb on + strand, within Pf6N2E2_15 at 46.139 kb on + strand, within Pf6N2E2_15 at 46.140 kb on - strand, within Pf6N2E2_15 at 46.285 kb on - strand at 46.348 kb on + strand at 46.401 kb on - strand at 46.831 kb on - strand, within Pf6N2E2_16 at 46.914 kb on + strand at 46.921 kb on + strand at 46.921 kb on + strand at 46.921 kb on + strand at 46.922 kb on - strand at 46.922 kb on - strand at 46.922 kb on - strand at 46.922 kb on - strand at 46.922 kb on - strand at 46.924 kb on + strand at 46.924 kb on + strand at 46.924 kb on + strand at 46.927 kb on + strand at 46.927 kb on + strand at 46.928 kb on - strand at 46.928 kb on - strand at 47.001 kb on + strand at 47.002 kb on - strand at 47.070 kb on + strand at 47.070 kb on + strand at 47.070 kb on + strand at 47.070 kb on + strand at 47.094 kb on + strand at 47.094 kb on + strand at 47.094 kb on + strand at 47.145 kb on + strand at 47.146 kb on - strand at 47.193 kb on + strand at 47.193 kb on + strand at 47.194 kb on - strand at 47.194 kb on - strand at 47.215 kb on + strand at 47.234 kb on + strand at 47.234 kb on + strand at 47.235 kb on - strand at 47.235 kb on - strand at 47.235 kb on - strand at 47.273 kb on - strand at 47.280 kb on + strand at 47.281 kb on - strand at 47.309 kb on - strand at 47.353 kb on - strand at 47.370 kb on + strand at 47.373 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction bromate 0.05 M remove 43,803 + Pf6N2E2_14 0.43 -0.5 43,991 + Pf6N2E2_14 0.57 +0.6 43,992 - Pf6N2E2_14 0.57 -0.2 43,992 - Pf6N2E2_14 0.57 +0.8 43,992 - Pf6N2E2_14 0.57 +0.1 44,135 + Pf6N2E2_14 0.67 +0.7 44,135 + Pf6N2E2_14 0.67 -1.8 44,235 + Pf6N2E2_14 0.75 -1.1 44,236 - Pf6N2E2_14 0.75 +0.6 44,633 - -0.3 44,686 + -0.4 44,688 + -0.4 44,689 - -1.5 44,714 + +0.5 44,751 + -0.3 44,751 + -1.2 44,751 + -0.8 44,824 + +0.8 44,824 + -0.3 44,824 + +0.3 44,827 + -1.4 44,828 - -0.2 45,044 - Pf6N2E2_15 0.16 -1.0 45,179 - Pf6N2E2_15 0.25 -0.8 45,179 - Pf6N2E2_15 0.25 +0.6 45,342 + Pf6N2E2_15 0.35 -0.9 45,342 + Pf6N2E2_15 0.35 -1.9 45,736 + Pf6N2E2_15 0.60 -0.8 45,775 + Pf6N2E2_15 0.62 -2.1 45,776 - Pf6N2E2_15 0.62 +0.1 45,776 - Pf6N2E2_15 0.62 +0.2 45,979 + Pf6N2E2_15 0.75 -0.2 46,139 + Pf6N2E2_15 0.85 -0.9 46,140 - Pf6N2E2_15 0.85 -1.9 46,285 - +0.6 46,348 + +0.6 46,401 - -0.9 46,831 - Pf6N2E2_16 0.76 +0.2 46,914 + -0.4 46,921 + +0.0 46,921 + +0.8 46,921 + +0.6 46,922 - -0.4 46,922 - +0.4 46,922 - +1.2 46,922 - +0.9 46,922 - -0.3 46,924 + +1.2 46,924 + +0.2 46,924 + +0.5 46,927 + +1.5 46,927 + +1.5 46,928 - +0.7 46,928 - -0.8 47,001 + -0.9 47,002 - -0.3 47,070 + -0.5 47,070 + -1.9 47,070 + +0.3 47,070 + -1.2 47,094 + -0.5 47,094 + +0.6 47,094 + -1.2 47,145 + -0.7 47,146 - -0.2 47,193 + +0.6 47,193 + +0.5 47,194 - -0.8 47,194 - +0.7 47,215 + -0.3 47,234 + +0.8 47,234 + +0.8 47,235 - +1.5 47,235 - -0.7 47,235 - -0.2 47,273 - -0.5 47,280 + -1.2 47,281 - +1.0 47,309 - +0.4 47,353 - -1.7 47,370 + -0.5 47,373 + +1.2
Or see this region's nucleotide sequence