Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_4193 and Ga0059261_4194 are separated by 11 nucleotides Ga0059261_4194 and Ga0059261_4195 overlap by 4 nucleotides Ga0059261_4195 and Ga0059261_4196 overlap by 4 nucleotides
Ga0059261_4193: Ga0059261_4193 - hypothetical protein, at 4,343,841 to 4,345,427
_4193
Ga0059261_4194: Ga0059261_4194 - Type II secretory pathway, component ExeA (predicted ATPase), at 4,345,439 to 4,346,545
_4194
Ga0059261_4195: Ga0059261_4195 - polysaccharide deacetylase family protein, PEP-CTERM locus subfamily, at 4,346,542 to 4,347,384
_4195
Ga0059261_4196: Ga0059261_4196 - FemAB-related protein, PEP-CTERM system-associated, at 4,347,381 to 4,348,454
_4196
Position (kb)
4345
4346
4347 Strain fitness (log2 ratio)
-1
0
1
2 at 4344.513 kb on + strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.514 kb on - strand, within Ga0059261_4193 at 4344.702 kb on + strand, within Ga0059261_4193 at 4344.702 kb on + strand, within Ga0059261_4193 at 4344.702 kb on + strand, within Ga0059261_4193 at 4344.703 kb on - strand, within Ga0059261_4193 at 4344.703 kb on - strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.741 kb on + strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.742 kb on - strand, within Ga0059261_4193 at 4344.789 kb on + strand, within Ga0059261_4193 at 4344.790 kb on - strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.804 kb on + strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.805 kb on - strand, within Ga0059261_4193 at 4344.806 kb on + strand, within Ga0059261_4193 at 4344.807 kb on - strand, within Ga0059261_4193 at 4344.861 kb on + strand, within Ga0059261_4193 at 4344.861 kb on + strand, within Ga0059261_4193 at 4344.861 kb on + strand, within Ga0059261_4193 at 4344.861 kb on + strand, within Ga0059261_4193 at 4344.861 kb on + strand, within Ga0059261_4193 at 4344.862 kb on - strand, within Ga0059261_4193 at 4344.862 kb on - strand, within Ga0059261_4193 at 4344.862 kb on - strand, within Ga0059261_4193 at 4344.862 kb on - strand, within Ga0059261_4193 at 4345.042 kb on - strand, within Ga0059261_4193 at 4345.042 kb on - strand, within Ga0059261_4193 at 4345.113 kb on + strand, within Ga0059261_4193 at 4345.113 kb on + strand, within Ga0059261_4193 at 4345.113 kb on + strand, within Ga0059261_4193 at 4345.114 kb on - strand, within Ga0059261_4193 at 4345.128 kb on + strand, within Ga0059261_4193 at 4345.128 kb on + strand, within Ga0059261_4193 at 4345.180 kb on - strand, within Ga0059261_4193 at 4345.180 kb on - strand, within Ga0059261_4193 at 4345.180 kb on - strand, within Ga0059261_4193 at 4345.180 kb on - strand, within Ga0059261_4193 at 4345.239 kb on + strand, within Ga0059261_4193 at 4345.239 kb on + strand, within Ga0059261_4193 at 4345.240 kb on - strand, within Ga0059261_4193 at 4345.240 kb on - strand, within Ga0059261_4193 at 4345.248 kb on + strand, within Ga0059261_4193 at 4345.248 kb on + strand, within Ga0059261_4193 at 4345.248 kb on + strand, within Ga0059261_4193 at 4345.249 kb on - strand, within Ga0059261_4193 at 4345.249 kb on - strand, within Ga0059261_4193 at 4345.251 kb on + strand, within Ga0059261_4193 at 4345.251 kb on + strand, within Ga0059261_4193 at 4345.251 kb on + strand, within Ga0059261_4193 at 4345.251 kb on + strand, within Ga0059261_4193 at 4345.252 kb on - strand, within Ga0059261_4193 at 4345.252 kb on - strand, within Ga0059261_4193 at 4345.308 kb on + strand at 4345.308 kb on + strand at 4345.308 kb on + strand at 4345.308 kb on + strand at 4345.308 kb on + strand at 4345.308 kb on + strand at 4345.309 kb on - strand at 4345.309 kb on - strand at 4345.309 kb on - strand at 4345.309 kb on - strand at 4345.311 kb on + strand at 4345.311 kb on + strand at 4345.311 kb on + strand at 4345.312 kb on - strand at 4345.312 kb on - strand at 4345.316 kb on + strand at 4345.316 kb on + strand at 4345.317 kb on - strand at 4345.385 kb on + strand at 4345.385 kb on + strand at 4345.385 kb on + strand at 4345.385 kb on + strand at 4345.385 kb on + strand at 4345.386 kb on - strand at 4345.386 kb on - strand at 4345.386 kb on - strand at 4345.442 kb on + strand at 4345.442 kb on + strand at 4345.442 kb on + strand at 4345.443 kb on - strand at 4345.443 kb on - strand at 4345.454 kb on + strand at 4345.454 kb on + strand at 4345.539 kb on - strand at 4345.539 kb on - strand at 4345.539 kb on - strand at 4345.732 kb on + strand, within Ga0059261_4194 at 4345.732 kb on + strand, within Ga0059261_4194 at 4345.733 kb on - strand, within Ga0059261_4194 at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.870 kb on + strand at 4345.870 kb on + strand, within Ga0059261_4194 at 4345.871 kb on - strand, within Ga0059261_4194 at 4345.871 kb on - strand, within Ga0059261_4194 at 4345.871 kb on - strand, within Ga0059261_4194 at 4345.871 kb on - strand, within Ga0059261_4194 at 4345.871 kb on - strand, within Ga0059261_4194 at 4346.036 kb on + strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.037 kb on - strand, within Ga0059261_4194 at 4346.507 kb on - strand at 4346.606 kb on + strand at 4346.607 kb on - strand at 4346.607 kb on - strand at 4346.734 kb on + strand, within Ga0059261_4195 at 4346.734 kb on + strand, within Ga0059261_4195 at 4346.735 kb on - strand, within Ga0059261_4195 at 4346.735 kb on - strand, within Ga0059261_4195 at 4346.754 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.965 kb on + strand, within Ga0059261_4195 at 4346.966 kb on - strand, within Ga0059261_4195 at 4346.966 kb on - strand, within Ga0059261_4195 at 4346.971 kb on + strand, within Ga0059261_4195 at 4346.971 kb on + strand, within Ga0059261_4195 at 4346.971 kb on + strand, within Ga0059261_4195 at 4346.971 kb on + strand, within Ga0059261_4195 at 4346.971 kb on + strand, within Ga0059261_4195 at 4346.972 kb on - strand, within Ga0059261_4195 at 4346.972 kb on - strand, within Ga0059261_4195 at 4346.972 kb on - strand, within Ga0059261_4195 at 4346.972 kb on - strand, within Ga0059261_4195 at 4347.007 kb on + strand, within Ga0059261_4195 at 4347.008 kb on - strand, within Ga0059261_4195 at 4347.008 kb on - strand, within Ga0059261_4195 at 4347.068 kb on - strand, within Ga0059261_4195 at 4347.155 kb on - strand, within Ga0059261_4195 at 4347.155 kb on - strand, within Ga0059261_4195 at 4347.155 kb on - strand, within Ga0059261_4195 at 4347.202 kb on + strand, within Ga0059261_4195 at 4347.202 kb on + strand, within Ga0059261_4195 at 4347.203 kb on - strand, within Ga0059261_4195 at 4347.203 kb on - strand, within Ga0059261_4195 at 4347.203 kb on - strand, within Ga0059261_4195 at 4347.277 kb on + strand, within Ga0059261_4195 at 4347.277 kb on + strand, within Ga0059261_4195 at 4347.277 kb on + strand, within Ga0059261_4195
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 4,344,513 + Ga0059261_4193 0.42 +1.1 4,344,514 - Ga0059261_4193 0.42 +0.8 4,344,514 - Ga0059261_4193 0.42 +1.5 4,344,514 - Ga0059261_4193 0.42 +1.1 4,344,514 - Ga0059261_4193 0.42 +0.1 4,344,514 - Ga0059261_4193 0.42 +0.5 4,344,514 - Ga0059261_4193 0.42 +0.0 4,344,514 - Ga0059261_4193 0.42 +0.2 4,344,514 - Ga0059261_4193 0.42 +0.3 4,344,702 + Ga0059261_4193 0.54 +1.0 4,344,702 + Ga0059261_4193 0.54 +0.5 4,344,702 + Ga0059261_4193 0.54 +0.5 4,344,703 - Ga0059261_4193 0.54 +0.5 4,344,703 - Ga0059261_4193 0.54 +0.7 4,344,741 + Ga0059261_4193 0.57 +0.1 4,344,741 + Ga0059261_4193 0.57 +0.1 4,344,741 + Ga0059261_4193 0.57 +0.3 4,344,741 + Ga0059261_4193 0.57 +0.7 4,344,741 + Ga0059261_4193 0.57 +0.4 4,344,741 + Ga0059261_4193 0.57 +0.7 4,344,741 + Ga0059261_4193 0.57 +0.9 4,344,741 + Ga0059261_4193 0.57 +0.5 4,344,741 + Ga0059261_4193 0.57 -0.0 4,344,741 + Ga0059261_4193 0.57 +0.2 4,344,742 - Ga0059261_4193 0.57 +0.5 4,344,742 - Ga0059261_4193 0.57 -0.0 4,344,742 - Ga0059261_4193 0.57 +0.8 4,344,742 - Ga0059261_4193 0.57 +0.7 4,344,742 - Ga0059261_4193 0.57 +0.2 4,344,742 - Ga0059261_4193 0.57 +1.2 4,344,742 - Ga0059261_4193 0.57 +0.3 4,344,742 - Ga0059261_4193 0.57 +0.9 4,344,742 - Ga0059261_4193 0.57 +0.4 4,344,742 - Ga0059261_4193 0.57 +0.2 4,344,742 - Ga0059261_4193 0.57 +0.4 4,344,742 - Ga0059261_4193 0.57 +0.5 4,344,789 + Ga0059261_4193 0.60 +1.0 4,344,790 - Ga0059261_4193 0.60 +0.1 4,344,804 + Ga0059261_4193 0.61 +0.5 4,344,804 + Ga0059261_4193 0.61 +0.6 4,344,804 + Ga0059261_4193 0.61 +0.9 4,344,804 + +1.4 4,344,804 + Ga0059261_4193 0.61 -0.4 4,344,804 + Ga0059261_4193 0.61 +0.1 4,344,804 + Ga0059261_4193 0.61 +0.1 4,344,804 + Ga0059261_4193 0.61 +1.2 4,344,804 + Ga0059261_4193 0.61 +0.8 4,344,804 + Ga0059261_4193 0.61 +1.3 4,344,804 + Ga0059261_4193 0.61 -0.4 4,344,804 + Ga0059261_4193 0.61 +0.1 4,344,805 - Ga0059261_4193 0.61 -0.2 4,344,805 - Ga0059261_4193 0.61 +0.6 4,344,805 - Ga0059261_4193 0.61 +0.7 4,344,805 - Ga0059261_4193 0.61 -0.8 4,344,805 - Ga0059261_4193 0.61 +1.0 4,344,805 - Ga0059261_4193 0.61 +1.1 4,344,805 - Ga0059261_4193 0.61 -0.2 4,344,805 - Ga0059261_4193 0.61 +1.0 4,344,806 + Ga0059261_4193 0.61 +0.5 4,344,807 - Ga0059261_4193 0.61 +0.8 4,344,861 + Ga0059261_4193 0.64 -0.2 4,344,861 + Ga0059261_4193 0.64 +0.2 4,344,861 + Ga0059261_4193 0.64 +0.7 4,344,861 + Ga0059261_4193 0.64 -0.2 4,344,861 + Ga0059261_4193 0.64 +0.5 4,344,862 - Ga0059261_4193 0.64 -0.4 4,344,862 - Ga0059261_4193 0.64 +1.8 4,344,862 - Ga0059261_4193 0.64 +0.6 4,344,862 - Ga0059261_4193 0.64 -0.3 4,345,042 - Ga0059261_4193 0.76 +0.0 4,345,042 - Ga0059261_4193 0.76 -0.3 4,345,113 + Ga0059261_4193 0.80 +0.1 4,345,113 + Ga0059261_4193 0.80 +0.4 4,345,113 + Ga0059261_4193 0.80 -0.2 4,345,114 - Ga0059261_4193 0.80 +0.1 4,345,128 + Ga0059261_4193 0.81 +0.5 4,345,128 + Ga0059261_4193 0.81 -0.2 4,345,180 - Ga0059261_4193 0.84 -0.1 4,345,180 - Ga0059261_4193 0.84 +1.0 4,345,180 - Ga0059261_4193 0.84 +0.1 4,345,180 - Ga0059261_4193 0.84 +0.7 4,345,239 + Ga0059261_4193 0.88 -0.9 4,345,239 + Ga0059261_4193 0.88 +0.6 4,345,240 - Ga0059261_4193 0.88 +0.5 4,345,240 - Ga0059261_4193 0.88 +1.0 4,345,248 + Ga0059261_4193 0.89 +1.0 4,345,248 + Ga0059261_4193 0.89 +0.7 4,345,248 + Ga0059261_4193 0.89 -0.3 4,345,249 - Ga0059261_4193 0.89 -0.9 4,345,249 - Ga0059261_4193 0.89 +1.3 4,345,251 + Ga0059261_4193 0.89 +0.6 4,345,251 + Ga0059261_4193 0.89 +0.9 4,345,251 + Ga0059261_4193 0.89 +0.6 4,345,251 + Ga0059261_4193 0.89 +0.4 4,345,252 - Ga0059261_4193 0.89 +0.8 4,345,252 - Ga0059261_4193 0.89 +0.8 4,345,308 + +1.2 4,345,308 + +1.6 4,345,308 + +0.5 4,345,308 + +0.5 4,345,308 + +1.4 4,345,308 + +0.5 4,345,309 - +0.4 4,345,309 - +0.7 4,345,309 - +0.4 4,345,309 - +0.7 4,345,311 + +1.2 4,345,311 + +0.4 4,345,311 + +0.1 4,345,312 - +0.1 4,345,312 - +0.3 4,345,316 + -0.1 4,345,316 + +0.0 4,345,317 - +0.5 4,345,385 + +0.5 4,345,385 + +0.6 4,345,385 + +2.5 4,345,385 + +0.1 4,345,385 + +1.3 4,345,386 - +0.6 4,345,386 - +0.6 4,345,386 - +0.7 4,345,442 + +1.1 4,345,442 + +0.3 4,345,442 + +1.0 4,345,443 - +0.3 4,345,443 - +0.5 4,345,454 + +1.2 4,345,454 + +0.1 4,345,539 - +0.4 4,345,539 - +1.1 4,345,539 - +0.5 4,345,732 + Ga0059261_4194 0.26 +0.2 4,345,732 + Ga0059261_4194 0.26 +0.3 4,345,733 - Ga0059261_4194 0.27 +0.7 4,345,870 + Ga0059261_4194 0.39 -0.1 4,345,870 + Ga0059261_4194 0.39 +0.4 4,345,870 + Ga0059261_4194 0.39 +0.8 4,345,870 + Ga0059261_4194 0.39 +0.4 4,345,870 + Ga0059261_4194 0.39 +0.7 4,345,870 + +1.4 4,345,870 + Ga0059261_4194 0.39 -0.5 4,345,871 - Ga0059261_4194 0.39 +0.4 4,345,871 - Ga0059261_4194 0.39 +0.4 4,345,871 - Ga0059261_4194 0.39 +0.7 4,345,871 - Ga0059261_4194 0.39 +0.0 4,345,871 - Ga0059261_4194 0.39 -0.2 4,346,036 + Ga0059261_4194 0.54 +0.4 4,346,037 - Ga0059261_4194 0.54 +1.7 4,346,037 - Ga0059261_4194 0.54 +0.5 4,346,037 - Ga0059261_4194 0.54 +0.6 4,346,037 - Ga0059261_4194 0.54 -0.5 4,346,037 - Ga0059261_4194 0.54 +0.8 4,346,037 - Ga0059261_4194 0.54 -0.2 4,346,507 - +0.4 4,346,606 + +1.6 4,346,607 - +0.5 4,346,607 - +0.4 4,346,734 + Ga0059261_4195 0.23 +0.4 4,346,734 + Ga0059261_4195 0.23 +0.1 4,346,735 - Ga0059261_4195 0.23 +0.2 4,346,735 - Ga0059261_4195 0.23 -1.0 4,346,754 + Ga0059261_4195 0.25 -0.2 4,346,965 + Ga0059261_4195 0.50 +0.6 4,346,965 + Ga0059261_4195 0.50 +0.8 4,346,965 + Ga0059261_4195 0.50 -0.4 4,346,965 + Ga0059261_4195 0.50 -0.3 4,346,965 + Ga0059261_4195 0.50 +0.7 4,346,965 + Ga0059261_4195 0.50 +0.8 4,346,966 - Ga0059261_4195 0.50 +0.6 4,346,966 - Ga0059261_4195 0.50 -0.2 4,346,971 + Ga0059261_4195 0.51 +0.7 4,346,971 + Ga0059261_4195 0.51 +0.3 4,346,971 + Ga0059261_4195 0.51 +0.5 4,346,971 + Ga0059261_4195 0.51 +1.3 4,346,971 + Ga0059261_4195 0.51 +0.8 4,346,972 - Ga0059261_4195 0.51 -0.0 4,346,972 - Ga0059261_4195 0.51 +0.1 4,346,972 - Ga0059261_4195 0.51 +0.4 4,346,972 - Ga0059261_4195 0.51 +1.1 4,347,007 + Ga0059261_4195 0.55 +1.8 4,347,008 - Ga0059261_4195 0.55 +0.2 4,347,008 - Ga0059261_4195 0.55 +0.8 4,347,068 - Ga0059261_4195 0.62 +0.5 4,347,155 - Ga0059261_4195 0.73 +0.3 4,347,155 - Ga0059261_4195 0.73 -0.1 4,347,155 - Ga0059261_4195 0.73 -0.4 4,347,202 + Ga0059261_4195 0.78 +0.5 4,347,202 + Ga0059261_4195 0.78 +0.3 4,347,203 - Ga0059261_4195 0.78 +0.3 4,347,203 - Ga0059261_4195 0.78 +0.2 4,347,203 - Ga0059261_4195 0.78 +0.5 4,347,277 + Ga0059261_4195 0.87 +0.5 4,347,277 + Ga0059261_4195 0.87 -0.1 4,347,277 + Ga0059261_4195 0.87 +0.7
Or see this region's nucleotide sequence