Strain Fitness in Vibrio cholerae E7946 ATCC 55056 around CSW01_12215

Experiment: LB_0.5%bileacids_Anaerobic_60MIN_ZN5B

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCSW01_12210 and CSW01_12215 are separated by 267 nucleotidesCSW01_12215 and CSW01_12220 are separated by 0 nucleotides CSW01_12210: CSW01_12210 - dihydrolipoyl dehydrogenase, at 2,612,710 to 2,614,137 _12210 CSW01_12215: CSW01_12215 - pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase, at 2,614,405 to 2,616,312 _12215 CSW01_12220: CSW01_12220 - pyruvate dehydrogenase (acetyl-transferring), homodimeric type, at 2,616,313 to 2,618,973 _12220 Position (kb) 2614 2615 2616 2617Strain fitness (log2 ratio) -1 0 1at 2616.512 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_0.5%bileacids_Anaerobic_60MIN_ZN5B
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2,616,512 + +0.4

Or see this region's nucleotide sequence