Strain Fitness in Shewanella loihica PV-4 around Shew_2838

Experiment: Fusidic 0.03125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.03125 mg/ml
3,362,277	+		Shew_2837	0.37	+3.3
3,362,613	-				+1.8
3,362,700	-				+0.6
3,362,870	-				+4.4
3,362,871	-				+4.3
3,362,871	-				+4.2
3,363,040	+				-0.7
3,363,290	-	carB	Shew_2838	0.13	-1.0
3,363,496	-	carB	Shew_2838	0.19	-1.1
3,363,627	-	carB	Shew_2838	0.23	-0.8
3,363,704	-	carB	Shew_2838	0.26	-0.3
3,364,405	-	carB	Shew_2838	0.48	-2.2
3,364,436	+	carB	Shew_2838	0.49	-0.1
3,364,444	-	carB	Shew_2838	0.49	-0.6
3,365,736	-	carB	Shew_2838	0.89	-0.8
3,365,806	-				-0.6
3,365,811	-				-1.0
3,365,811	-				-0.3
3,365,892	+				-0.2
3,365,892	+				-0.8
3,365,950	-				-0.4
3,366,239	+		Shew_2839	0.11	-0.4
3,366,247	-		Shew_2839	0.11	-0.0
3,366,291	-		Shew_2839	0.15	-0.5
3,366,292	-		Shew_2839	0.15	-0.6