Strain Fitness in Shewanella loihica PV-4 around Shew_0990
Experiment: Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.03125 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,145,302 | - | Shew_0989 | 0.33 | +0.1 | |
| 1,145,383 | + | Shew_0989 | 0.39 | -0.3 | |
| 1,145,424 | - | Shew_0989 | 0.42 | +0.6 | |
| 1,145,558 | + | Shew_0989 | 0.52 | +0.1 | |
| 1,145,652 | + | Shew_0989 | 0.60 | +0.3 | |
| 1,145,665 | - | Shew_0989 | 0.61 | +0.6 | |
| 1,145,665 | - | Shew_0989 | 0.61 | +0.2 | |
| 1,145,680 | - | Shew_0989 | 0.62 | +0.4 | |
| 1,146,023 | - | Shew_0989 | 0.88 | +0.3 | |
| 1,146,275 | + | Shew_0990 | 0.17 | -0.5 | |
| 1,146,368 | - | Shew_0990 | 0.36 | +0.1 | |
| 1,146,475 | + | Shew_0990 | 0.59 | -0.3 | |
| 1,146,716 | - | -1.8 | |||
| 1,146,909 | + | -0.1 | |||
| 1,147,017 | + | -0.9 |
Or see this region's nucleotide sequence