Experiment: Fusidic 0.03125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0490 and Shew_0491 are separated by 81 nucleotides Shew_0491 and Shew_0492 are separated by 129 nucleotides
Shew_0490: Shew_0490 - peptidase S9 prolyl oligopeptidase (RefSeq), at 546,050 to 548,077
_0490
Shew_0491: Shew_0491 - hypothetical protein (RefSeq), at 548,159 to 548,413
_0491
Shew_0492: Shew_0492 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,543 to 550,135
_0492
Position (kb) 548
549 Strain fitness (log2 ratio) -1
0
1 at 547.243 kb on + strand, within Shew_0490 at 547.313 kb on - strand, within Shew_0490 at 547.474 kb on - strand, within Shew_0490 at 547.591 kb on + strand, within Shew_0490 at 547.599 kb on - strand, within Shew_0490 at 547.599 kb on - strand, within Shew_0490 at 547.621 kb on + strand, within Shew_0490 at 547.809 kb on + strand, within Shew_0490 at 547.878 kb on + strand at 547.922 kb on + strand at 547.935 kb on - strand at 547.935 kb on - strand at 548.195 kb on - strand, within Shew_0491 at 548.246 kb on + strand, within Shew_0491 at 548.370 kb on + strand, within Shew_0491 at 548.580 kb on + strand at 548.667 kb on - strand at 548.736 kb on + strand, within Shew_0492 at 548.870 kb on - strand, within Shew_0492 at 548.951 kb on + strand, within Shew_0492 at 549.056 kb on + strand, within Shew_0492 at 549.130 kb on + strand, within Shew_0492 at 549.294 kb on + strand, within Shew_0492 at 549.307 kb on + strand, within Shew_0492
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.03125 mg/ml remove 547,243 + Shew_0490 0.59 +0.2 547,313 - Shew_0490 0.62 +0.3 547,474 - Shew_0490 0.70 +0.0 547,591 + Shew_0490 0.76 +0.0 547,599 - Shew_0490 0.76 +0.3 547,599 - Shew_0490 0.76 +0.5 547,621 + Shew_0490 0.77 -0.4 547,809 + Shew_0490 0.87 +0.3 547,878 + -0.2 547,922 + -0.1 547,935 - +0.6 547,935 - -0.0 548,195 - Shew_0491 0.14 -0.0 548,246 + Shew_0491 0.34 +0.1 548,370 + Shew_0491 0.83 -1.3 548,580 + +0.3 548,667 - +0.1 548,736 + Shew_0492 0.12 +0.3 548,870 - Shew_0492 0.21 +0.6 548,951 + Shew_0492 0.26 +0.6 549,056 + Shew_0492 0.32 +0.3 549,130 + Shew_0492 0.37 +0.1 549,294 + Shew_0492 0.47 -0.1 549,307 + Shew_0492 0.48 +0.1
Or see this region's nucleotide sequence