Experiment: arsenate 0.0005 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6040 and Pf6N2E2_6041 are separated by 144 nucleotides Pf6N2E2_6041 and Pf6N2E2_6042 are separated by 127 nucleotides Pf6N2E2_6042 and Pf6N2E2_6043 are separated by 723 nucleotides
Pf6N2E2_6040 - hypothetical protein, at 6,860,347 to 6,861,024
_6040
Pf6N2E2_6041 - hypothetical protein, at 6,861,169 to 6,861,792
_6041
Pf6N2E2_6042 - hypothetical protein, at 6,861,920 to 6,862,060
_6042
Pf6N2E2_6043 - hypothetical protein, at 6,862,784 to 6,863,062
_6043
Position (kb)
6861
6862
6863 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6861.055 kb on + strand at 6861.055 kb on + strand at 6861.055 kb on + strand at 6861.056 kb on - strand at 6861.063 kb on - strand at 6861.092 kb on - strand at 6861.132 kb on + strand at 6861.132 kb on + strand at 6861.133 kb on - strand at 6861.270 kb on + strand, within Pf6N2E2_6041 at 6861.271 kb on - strand, within Pf6N2E2_6041 at 6861.397 kb on + strand, within Pf6N2E2_6041 at 6861.475 kb on + strand, within Pf6N2E2_6041 at 6861.532 kb on + strand, within Pf6N2E2_6041 at 6861.562 kb on + strand, within Pf6N2E2_6041 at 6861.563 kb on - strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.564 kb on + strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.565 kb on - strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.583 kb on + strand, within Pf6N2E2_6041 at 6861.584 kb on - strand, within Pf6N2E2_6041 at 6861.584 kb on - strand, within Pf6N2E2_6041 at 6861.584 kb on - strand, within Pf6N2E2_6041 at 6861.584 kb on - strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.637 kb on + strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.638 kb on - strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.641 kb on + strand, within Pf6N2E2_6041 at 6861.642 kb on - strand, within Pf6N2E2_6041 at 6861.642 kb on - strand, within Pf6N2E2_6041 at 6861.642 kb on - strand, within Pf6N2E2_6041 at 6861.642 kb on - strand, within Pf6N2E2_6041 at 6861.642 kb on - strand, within Pf6N2E2_6041 at 6861.772 kb on + strand at 6861.772 kb on + strand at 6861.772 kb on + strand at 6861.772 kb on + strand at 6861.772 kb on + strand at 6861.773 kb on - strand at 6861.773 kb on - strand at 6861.773 kb on - strand at 6861.773 kb on - strand at 6861.790 kb on + strand at 6861.921 kb on + strand at 6861.921 kb on + strand at 6861.921 kb on + strand at 6861.921 kb on + strand at 6861.921 kb on + strand at 6861.923 kb on + strand at 6861.923 kb on + strand at 6861.923 kb on + strand at 6861.923 kb on + strand at 6862.118 kb on - strand at 6862.167 kb on - strand at 6862.167 kb on - strand at 6862.201 kb on + strand at 6862.216 kb on - strand at 6862.216 kb on - strand at 6862.261 kb on - strand at 6862.261 kb on - strand at 6862.261 kb on - strand at 6862.299 kb on + strand at 6862.299 kb on + strand at 6862.299 kb on + strand at 6862.440 kb on - strand at 6862.542 kb on + strand at 6862.542 kb on + strand at 6862.542 kb on + strand at 6862.543 kb on - strand at 6862.543 kb on - strand at 6862.544 kb on + strand at 6862.544 kb on + strand at 6862.544 kb on + strand at 6862.545 kb on - strand at 6862.545 kb on - strand at 6862.551 kb on + strand at 6862.551 kb on + strand at 6862.577 kb on + strand at 6862.644 kb on + strand at 6862.645 kb on - strand at 6862.785 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction arsenate 0.0005 M remove 6,861,055 + +0.0 6,861,055 + -0.0 6,861,055 + -0.5 6,861,056 - +0.8 6,861,063 - +2.3 6,861,092 - +0.5 6,861,132 + +0.9 6,861,132 + +1.3 6,861,133 - +0.3 6,861,270 + Pf6N2E2_6041 0.16 +0.7 6,861,271 - Pf6N2E2_6041 0.16 +0.6 6,861,397 + Pf6N2E2_6041 0.37 -0.3 6,861,475 + Pf6N2E2_6041 0.49 +0.1 6,861,532 + Pf6N2E2_6041 0.58 -0.3 6,861,562 + Pf6N2E2_6041 0.63 +0.9 6,861,563 - Pf6N2E2_6041 0.63 +0.9 6,861,564 + Pf6N2E2_6041 0.63 -0.1 6,861,564 + Pf6N2E2_6041 0.63 -0.2 6,861,564 + Pf6N2E2_6041 0.63 -2.7 6,861,564 + Pf6N2E2_6041 0.63 +0.6 6,861,564 + Pf6N2E2_6041 0.63 +0.6 6,861,564 + Pf6N2E2_6041 0.63 +1.5 6,861,564 + Pf6N2E2_6041 0.63 +0.4 6,861,565 - Pf6N2E2_6041 0.63 +0.3 6,861,565 - Pf6N2E2_6041 0.63 -2.0 6,861,565 - Pf6N2E2_6041 0.63 -0.6 6,861,565 - Pf6N2E2_6041 0.63 +0.1 6,861,565 - Pf6N2E2_6041 0.63 -1.8 6,861,565 - Pf6N2E2_6041 0.63 -0.9 6,861,565 - Pf6N2E2_6041 0.63 +2.5 6,861,583 + Pf6N2E2_6041 0.66 -0.1 6,861,583 + Pf6N2E2_6041 0.66 +0.2 6,861,583 + Pf6N2E2_6041 0.66 +0.3 6,861,583 + Pf6N2E2_6041 0.66 +0.8 6,861,583 + Pf6N2E2_6041 0.66 -1.1 6,861,583 + Pf6N2E2_6041 0.66 +0.2 6,861,583 + Pf6N2E2_6041 0.66 -0.7 6,861,583 + Pf6N2E2_6041 0.66 -1.5 6,861,583 + Pf6N2E2_6041 0.66 +0.3 6,861,583 + Pf6N2E2_6041 0.66 -0.6 6,861,584 - Pf6N2E2_6041 0.67 +0.1 6,861,584 - Pf6N2E2_6041 0.67 -0.3 6,861,584 - Pf6N2E2_6041 0.67 +0.8 6,861,584 - Pf6N2E2_6041 0.67 +0.1 6,861,637 + Pf6N2E2_6041 0.75 +0.0 6,861,637 + Pf6N2E2_6041 0.75 +0.3 6,861,637 + Pf6N2E2_6041 0.75 +0.4 6,861,637 + Pf6N2E2_6041 0.75 -0.2 6,861,637 + Pf6N2E2_6041 0.75 +0.3 6,861,637 + Pf6N2E2_6041 0.75 -0.0 6,861,637 + Pf6N2E2_6041 0.75 -0.7 6,861,637 + Pf6N2E2_6041 0.75 +0.5 6,861,637 + Pf6N2E2_6041 0.75 +0.7 6,861,637 + Pf6N2E2_6041 0.75 -1.2 6,861,637 + Pf6N2E2_6041 0.75 -0.3 6,861,638 - Pf6N2E2_6041 0.75 -0.6 6,861,638 - Pf6N2E2_6041 0.75 -0.9 6,861,638 - Pf6N2E2_6041 0.75 +0.5 6,861,638 - Pf6N2E2_6041 0.75 +2.2 6,861,638 - Pf6N2E2_6041 0.75 -0.0 6,861,638 - Pf6N2E2_6041 0.75 +0.1 6,861,638 - Pf6N2E2_6041 0.75 +0.0 6,861,638 - Pf6N2E2_6041 0.75 +0.5 6,861,638 - Pf6N2E2_6041 0.75 -1.2 6,861,638 - Pf6N2E2_6041 0.75 +0.6 6,861,638 - Pf6N2E2_6041 0.75 +0.6 6,861,641 + Pf6N2E2_6041 0.76 -0.3 6,861,641 + Pf6N2E2_6041 0.76 -0.4 6,861,641 + Pf6N2E2_6041 0.76 -1.8 6,861,641 + Pf6N2E2_6041 0.76 +0.4 6,861,641 + Pf6N2E2_6041 0.76 +0.6 6,861,641 + Pf6N2E2_6041 0.76 -1.3 6,861,641 + Pf6N2E2_6041 0.76 +0.8 6,861,641 + Pf6N2E2_6041 0.76 +0.5 6,861,641 + Pf6N2E2_6041 0.76 -0.7 6,861,642 - Pf6N2E2_6041 0.76 +0.3 6,861,642 - Pf6N2E2_6041 0.76 +0.5 6,861,642 - Pf6N2E2_6041 0.76 -0.9 6,861,642 - Pf6N2E2_6041 0.76 +2.0 6,861,642 - Pf6N2E2_6041 0.76 +0.3 6,861,772 + -0.5 6,861,772 + +0.1 6,861,772 + -1.0 6,861,772 + +0.5 6,861,772 + -1.2 6,861,773 - -0.3 6,861,773 - -0.2 6,861,773 - +0.9 6,861,773 - +1.0 6,861,790 + -0.6 6,861,921 + +0.6 6,861,921 + +1.6 6,861,921 + +0.6 6,861,921 + +1.3 6,861,921 + +1.7 6,861,923 + -2.0 6,861,923 + +1.1 6,861,923 + +0.7 6,861,923 + +0.4 6,862,118 - -2.4 6,862,167 - +1.5 6,862,167 - +1.4 6,862,201 + -2.0 6,862,216 - -1.1 6,862,216 - +0.3 6,862,261 - -0.5 6,862,261 - -1.0 6,862,261 - -1.0 6,862,299 + +0.5 6,862,299 + -0.1 6,862,299 + +0.1 6,862,440 - +1.5 6,862,542 + +0.5 6,862,542 + -1.5 6,862,542 + +0.6 6,862,543 - -0.6 6,862,543 - -0.6 6,862,544 + +0.0 6,862,544 + +0.5 6,862,544 + +0.0 6,862,545 - +1.1 6,862,545 - -0.3 6,862,551 + -0.5 6,862,551 + +0.6 6,862,577 + +0.1 6,862,644 + -0.0 6,862,645 - +1.2 6,862,785 + -0.2
Or see this region's nucleotide sequence