Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08080

Experiment: Formate McCas no stress control 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 2
1,520,424	+				-0.4
1,520,488	-				-0.2
1,520,488	-				+0.0
1,520,488	-				+0.4
1,520,489	+				-0.4
1,520,489	+				+0.0
1,520,489	+				-0.1
1,520,489	+				+0.1
1,520,489	+				+0.3
1,520,489	+				+0.1
1,520,489	+				+0.6
1,520,510	+				+0.5
1,520,559	-				-0.5
1,520,639	-		MMP_RS08070	0.25	-0.6
1,520,670	-		MMP_RS08070	0.30	-0.7
1,520,727	+		MMP_RS08070	0.41	-0.5
1,520,838	-		MMP_RS08070	0.62	-0.5
1,520,909	+		MMP_RS08070	0.75	-0.4
1,520,912	+		MMP_RS08070	0.76	-0.0
1,520,915	-		MMP_RS08070	0.76	-0.6
1,521,003	-				-0.9
1,521,004	+				-0.5
1,521,004	+				-0.4
1,521,151	-		MMP_RS08075	0.43	+0.0
1,521,152	+		MMP_RS08075	0.43	-0.4
1,521,158	-		MMP_RS08075	0.45	-0.1
1,521,186	-		MMP_RS08075	0.54	+0.0
1,521,190	+		MMP_RS08075	0.55	-0.5
1,521,348	-				-0.1
1,521,350	-				-0.4
1,521,369	-				-0.2
1,521,370	+				-0.1
1,521,370	+				-0.3
1,521,370	+				-0.4
1,521,373	-				+0.3
1,521,493	-		MMP_RS08080	0.21	+0.3
1,521,493	-		MMP_RS08080	0.21	+0.1
1,521,564	+		MMP_RS08080	0.30	-0.5
1,521,572	+		MMP_RS08080	0.31	+0.1
1,521,577	+		MMP_RS08080	0.32	+0.3
1,521,755	-		MMP_RS08080	0.55	+0.2
1,521,849	-		MMP_RS08080	0.68	-0.1
1,521,868	-		MMP_RS08080	0.70	+0.0
1,521,881	+		MMP_RS08080	0.72	-0.2
1,521,909	+		MMP_RS08080	0.76	-0.0
1,521,977	-		MMP_RS08080	0.85	-0.4
1,522,010	-		MMP_RS08080	0.89	-0.4
1,522,015	-		MMP_RS08080	0.90	-0.0
1,522,015	-		MMP_RS08080	0.90	-0.2
1,522,071	-				+0.1
1,522,076	+				-0.1
1,522,086	+				-0.2
1,522,123	-				-1.1
1,522,265	+		MMP_RS08085	0.17	-0.2
1,522,309	-		MMP_RS08085	0.22	+0.1
1,522,349	+		MMP_RS08085	0.26	+0.6
1,522,377	-		MMP_RS08085	0.29	+0.2
1,522,387	-		MMP_RS08085	0.30	+0.6
1,522,414	-		MMP_RS08085	0.33	+1.1
1,522,458	+		MMP_RS08085	0.38	-0.0
1,522,479	-		MMP_RS08085	0.40	+0.1
1,522,480	+		MMP_RS08085	0.40	+0.1
1,522,570	+		MMP_RS08085	0.50	+0.3
1,522,595	+		MMP_RS08085	0.53	-0.5
1,522,658	-		MMP_RS08085	0.59	+0.1
1,522,664	+		MMP_RS08085	0.60	+0.2
1,522,672	+		MMP_RS08085	0.61	-0.5
1,522,672	+		MMP_RS08085	0.61	+0.1
1,522,704	+		MMP_RS08085	0.64	-0.3
1,522,704	+		MMP_RS08085	0.64	+0.6
1,522,707	+		MMP_RS08085	0.65	+0.2
1,522,727	+		MMP_RS08085	0.67	-0.5
1,522,847	+		MMP_RS08085	0.80	-0.2
1,522,859	+		MMP_RS08085	0.81	-0.1
1,522,951	+				+0.6
1,522,952	-				+0.1
1,522,991	-				-0.0
1,523,023	-				-0.5
1,523,024	+				+0.0
1,523,029	+				+0.2
1,523,029	+				+1.1
1,523,029	+				+0.1
1,523,029	+				+1.0
1,523,040	-				+0.3
1,523,064	-				+0.4
1,523,088	+				+0.4
1,523,091	-				-2.1
1,523,092	+				+0.2
1,523,092	+				+0.4
1,523,092	+				+0.4
1,523,093	-				-0.2
1,523,093	-				+0.5