Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2241 and Ga0059261_2242 are separated by 40 nucleotides Ga0059261_2242 and Ga0059261_2243 are separated by 89 nucleotides
Ga0059261_2241: Ga0059261_2241 - Uncharacterized protein conserved in bacteria, at 2,341,023 to 2,342,771
_2241
Ga0059261_2242: Ga0059261_2242 - phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 2,342,812 to 2,344,383
_2242
Ga0059261_2243: Ga0059261_2243 - Membrane protein involved in the export of O-antigen and teichoic acid, at 2,344,473 to 2,345,990
_2243
Position (kb)
2342
2343
2344
2345 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.848 kb on + strand, within Ga0059261_2241 at 2341.849 kb on - strand, within Ga0059261_2241 at 2341.849 kb on - strand, within Ga0059261_2241 at 2341.849 kb on - strand, within Ga0059261_2241 at 2341.849 kb on - strand, within Ga0059261_2241 at 2341.967 kb on - strand at 2341.982 kb on + strand, within Ga0059261_2241 at 2341.982 kb on + strand, within Ga0059261_2241 at 2341.982 kb on + strand, within Ga0059261_2241 at 2341.982 kb on + strand, within Ga0059261_2241 at 2341.982 kb on + strand, within Ga0059261_2241 at 2341.983 kb on - strand, within Ga0059261_2241 at 2341.983 kb on - strand, within Ga0059261_2241 at 2342.053 kb on - strand at 2342.053 kb on - strand, within Ga0059261_2241 at 2342.400 kb on + strand, within Ga0059261_2241 at 2342.400 kb on + strand, within Ga0059261_2241 at 2342.401 kb on - strand, within Ga0059261_2241 at 2342.401 kb on - strand, within Ga0059261_2241 at 2342.401 kb on - strand, within Ga0059261_2241 at 2342.711 kb on - strand at 2342.769 kb on + strand at 2342.798 kb on + strand at 2343.481 kb on + strand at 2344.398 kb on + strand at 2344.398 kb on + strand at 2344.398 kb on + strand at 2344.399 kb on - strand at 2344.399 kb on - strand at 2344.399 kb on - strand at 2344.522 kb on - strand at 2344.558 kb on + strand at 2344.559 kb on - strand at 2344.559 kb on - strand at 2344.786 kb on + strand, within Ga0059261_2243 at 2344.787 kb on - strand, within Ga0059261_2243 at 2344.836 kb on + strand, within Ga0059261_2243 at 2344.897 kb on + strand, within Ga0059261_2243 at 2344.898 kb on + strand at 2345.203 kb on + strand, within Ga0059261_2243 at 2345.203 kb on + strand, within Ga0059261_2243 at 2345.207 kb on - strand, within Ga0059261_2243 at 2345.207 kb on - strand, within Ga0059261_2243
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,341,848 + Ga0059261_2241 0.47 -1.0 2,341,848 + Ga0059261_2241 0.47 +0.9 2,341,848 + Ga0059261_2241 0.47 -0.8 2,341,848 + Ga0059261_2241 0.47 -0.2 2,341,848 + Ga0059261_2241 0.47 +0.7 2,341,848 + Ga0059261_2241 0.47 -0.0 2,341,848 + Ga0059261_2241 0.47 +0.0 2,341,848 + Ga0059261_2241 0.47 +1.3 2,341,849 - Ga0059261_2241 0.47 +0.4 2,341,849 - Ga0059261_2241 0.47 +1.1 2,341,849 - Ga0059261_2241 0.47 +0.6 2,341,849 - Ga0059261_2241 0.47 +0.3 2,341,967 - +2.5 2,341,982 + Ga0059261_2241 0.55 +0.6 2,341,982 + Ga0059261_2241 0.55 +1.0 2,341,982 + Ga0059261_2241 0.55 -0.8 2,341,982 + Ga0059261_2241 0.55 -0.5 2,341,982 + Ga0059261_2241 0.55 +0.1 2,341,983 - Ga0059261_2241 0.55 +1.1 2,341,983 - Ga0059261_2241 0.55 +0.3 2,342,053 - -0.9 2,342,053 - Ga0059261_2241 0.59 +0.3 2,342,400 + Ga0059261_2241 0.79 +0.1 2,342,400 + Ga0059261_2241 0.79 +0.7 2,342,401 - Ga0059261_2241 0.79 +0.1 2,342,401 - Ga0059261_2241 0.79 -0.2 2,342,401 - Ga0059261_2241 0.79 +0.4 2,342,711 - -0.5 2,342,769 + -0.3 2,342,798 + +0.6 2,343,481 + -0.9 2,344,398 + -0.3 2,344,398 + +0.1 2,344,398 + -0.9 2,344,399 - +0.4 2,344,399 - +0.5 2,344,399 - -0.4 2,344,522 - -1.9 2,344,558 + +1.1 2,344,559 - -0.2 2,344,559 - -1.2 2,344,786 + Ga0059261_2243 0.21 -1.7 2,344,787 - Ga0059261_2243 0.21 -0.5 2,344,836 + Ga0059261_2243 0.24 -1.2 2,344,897 + Ga0059261_2243 0.28 -1.5 2,344,898 + +0.1 2,345,203 + Ga0059261_2243 0.48 -1.2 2,345,203 + Ga0059261_2243 0.48 -2.0 2,345,207 - Ga0059261_2243 0.48 +1.5 2,345,207 - Ga0059261_2243 0.48 -1.7
Or see this region's nucleotide sequence