Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12425

Experiment: Methyl beta-D-glucopyranoside (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Methyl beta-D-glucopyranoside (C)
3,098,584	+		CA265_RS12420	0.52	+1.1
3,098,585	-		CA265_RS12420	0.52	+0.1
3,098,591	+		CA265_RS12420	0.52	+0.9
3,098,612	+		CA265_RS12420	0.53	+0.2
3,098,647	+		CA265_RS12420	0.55	+0.7
3,098,679	+		CA265_RS12420	0.57	+0.2
3,098,679	+		CA265_RS12420	0.57	+0.5
3,098,710	-		CA265_RS12420	0.58	+0.4
3,098,754	-		CA265_RS12420	0.61	+0.4
3,098,767	+		CA265_RS12420	0.61	+0.6
3,098,768	-		CA265_RS12420	0.61	-1.3
3,098,791	+		CA265_RS12420	0.63	-0.3
3,098,791	+		CA265_RS12420	0.63	+0.9
3,098,792	-		CA265_RS12420	0.63	-0.7
3,098,812	+		CA265_RS12420	0.64	+0.6
3,098,812	+		CA265_RS12420	0.64	-0.6
3,098,832	+		CA265_RS12420	0.65	-0.1
3,098,856	+		CA265_RS12420	0.66	+1.1
3,098,857	-		CA265_RS12420	0.66	+0.3
3,098,913	+		CA265_RS12420	0.69	+0.3
3,098,914	-		CA265_RS12420	0.69	-0.1
3,098,950	+		CA265_RS12420	0.71	-0.7
3,098,974	-		CA265_RS12420	0.72	-0.4
3,098,997	+		CA265_RS12420	0.73	+0.4
3,099,009	-		CA265_RS12420	0.74	-1.8
3,099,085	+		CA265_RS12420	0.78	-0.4
3,099,086	-		CA265_RS12420	0.78	+0.2
3,099,086	-		CA265_RS12420	0.78	-0.5
3,099,127	+		CA265_RS12420	0.80	+0.9
3,099,127	+		CA265_RS12420	0.80	-0.5
3,099,128	-		CA265_RS12420	0.80	-1.3
3,099,140	-		CA265_RS12420	0.81	+0.5
3,099,220	+		CA265_RS12420	0.85	-0.1
3,099,222	+		CA265_RS12420	0.85	-0.4
3,099,223	-		CA265_RS12420	0.85	-0.1
3,099,234	-		CA265_RS12420	0.85	-0.6
3,099,246	+		CA265_RS12420	0.86	-0.6
3,099,258	-		CA265_RS12420	0.87	+0.3
3,099,285	-		CA265_RS12420	0.88	-0.3
3,099,326	+				+0.7
3,099,328	+				-0.1
3,099,328	+				-0.4
3,099,328	+				+0.9
3,099,328	+				+0.7
3,099,329	-				-0.4
3,099,339	+				-0.8
3,099,409	-				+0.6
3,099,469	-				+0.8
3,099,469	-				+0.1
3,099,527	+				-2.1
3,099,528	-				+0.3
3,099,531	+				+1.0
3,099,557	-				+0.3
3,099,557	-				-0.6
3,099,581	+				+1.0
3,099,582	-				-0.4
3,099,584	+				-0.2
3,099,585	-				+0.6
3,099,608	-				-0.0
3,099,636	-				-0.1
3,099,682	-				+0.7
3,099,789	-				-0.5
3,099,843	+				-0.1
3,099,844	-				+0.2
3,099,847	-				-0.2
3,099,902	+				+0.6
3,099,952	-		CA265_RS12425	0.11	-1.4
3,099,971	-		CA265_RS12425	0.12	-1.1
3,099,980	-		CA265_RS12425	0.12	+0.3
3,100,025	-		CA265_RS12425	0.13	+1.3
3,100,050	+		CA265_RS12425	0.14	-0.2
3,100,080	+		CA265_RS12425	0.15	-0.2
3,100,080	+		CA265_RS12425	0.15	+0.9
3,100,113	-		CA265_RS12425	0.16	+0.7
3,100,145	+		CA265_RS12425	0.17	+0.7
3,100,154	+		CA265_RS12425	0.17	+0.7
3,100,158	+		CA265_RS12425	0.17	+0.5
3,100,224	-		CA265_RS12425	0.19	+0.4
3,100,229	+		CA265_RS12425	0.19	+0.4
3,100,270	+		CA265_RS12425	0.20	+0.9
3,100,276	-		CA265_RS12425	0.20	+0.7
3,100,295	+		CA265_RS12425	0.21	+0.9
3,100,296	-		CA265_RS12425	0.21	-0.1
3,100,314	+		CA265_RS12425	0.21	-0.4
3,100,315	-		CA265_RS12425	0.21	-0.2
3,100,344	-		CA265_RS12425	0.22	+0.3
3,100,492	+		CA265_RS12425	0.26	+0.8
3,100,492	+		CA265_RS12425	0.26	-0.9
3,100,492	+		CA265_RS12425	0.26	-0.2
3,100,492	+		CA265_RS12425	0.26	-0.2
3,100,506	-		CA265_RS12425	0.27	-0.2
3,100,588	+		CA265_RS12425	0.29	+1.5
3,100,631	+		CA265_RS12425	0.30	+0.2
3,100,631	+		CA265_RS12425	0.30	+0.8
3,100,632	-		CA265_RS12425	0.30	+0.5
3,100,686	-		CA265_RS12425	0.32	-1.9
3,100,729	+		CA265_RS12425	0.33	-0.5
3,100,965	-		CA265_RS12425	0.40	-0.4
3,100,968	+		CA265_RS12425	0.40	-0.6
3,100,968	+		CA265_RS12425	0.40	+0.2
3,100,969	-		CA265_RS12425	0.40	-0.8
3,100,989	+		CA265_RS12425	0.40	-0.5
3,101,001	+		CA265_RS12425	0.41	-1.2
3,101,004	+		CA265_RS12425	0.41	-0.6
3,101,005	-		CA265_RS12425	0.41	+0.3
3,101,005	-		CA265_RS12425	0.41	+0.7
3,101,128	-		CA265_RS12425	0.44	-0.8
3,101,130	+		CA265_RS12425	0.44	-0.6
3,101,130	+		CA265_RS12425	0.44	-0.4
3,101,132	+		CA265_RS12425	0.44	-0.6
3,101,143	+		CA265_RS12425	0.45	-0.1
3,101,143	+		CA265_RS12425	0.45	+0.1
3,101,185	-		CA265_RS12425	0.46	-0.8
3,101,270	+		CA265_RS12425	0.48	-1.0
3,101,307	+		CA265_RS12425	0.49	-1.0
3,101,427	-		CA265_RS12425	0.53	-0.0
3,101,427	-		CA265_RS12425	0.53	+0.8
3,101,434	+		CA265_RS12425	0.53	-2.0
3,101,465	+		CA265_RS12425	0.54	-0.4
3,101,495	+		CA265_RS12425	0.54	-0.8
3,101,495	+		CA265_RS12425	0.54	-1.1
3,101,496	-		CA265_RS12425	0.54	-0.0
3,101,555	+		CA265_RS12425	0.56	+0.5
3,101,555	+		CA265_RS12425	0.56	+0.0
3,101,563	-		CA265_RS12425	0.56	+0.7
3,101,595	+		CA265_RS12425	0.57	-0.8
3,101,620	-		CA265_RS12425	0.58	+0.9
3,101,620	-		CA265_RS12425	0.58	+1.7
3,101,668	-		CA265_RS12425	0.59	-0.4
3,101,670	+		CA265_RS12425	0.59	+0.4
3,101,670	+		CA265_RS12425	0.59	+0.4
3,101,671	-		CA265_RS12425	0.59	-1.3
3,101,671	-		CA265_RS12425	0.59	+0.2
3,101,694	+		CA265_RS12425	0.60	-0.6
3,101,727	+		CA265_RS12425	0.61	-0.0
3,101,728	-		CA265_RS12425	0.61	-0.3
3,101,759	+		CA265_RS12425	0.62	+0.6
3,101,763	+		CA265_RS12425	0.62	+0.3
3,101,763	+		CA265_RS12425	0.62	-0.5
3,101,763	+		CA265_RS12425	0.62	-0.4
3,101,778	+		CA265_RS12425	0.62	+0.2
3,101,852	+		CA265_RS12425	0.64	-0.9
3,101,852	+		CA265_RS12425	0.64	-0.0
3,101,852	+		CA265_RS12425	0.64	-0.7
3,101,853	-		CA265_RS12425	0.64	-0.0
3,101,853	-		CA265_RS12425	0.64	-0.0
3,101,980	-		CA265_RS12425	0.68	+0.2
3,102,007	-		CA265_RS12425	0.69	-0.1
3,102,011	+		CA265_RS12425	0.69	-1.4
3,102,012	-		CA265_RS12425	0.69	+0.1
3,102,012	-		CA265_RS12425	0.69	+0.6
3,102,076	-		CA265_RS12425	0.71	-0.2
3,102,078	+		CA265_RS12425	0.71	+0.6
3,102,095	-		CA265_RS12425	0.71	-0.1
3,102,133	+		CA265_RS12425	0.72	+0.7
3,102,134	-		CA265_RS12425	0.72	+0.2
3,102,158	+		CA265_RS12425	0.73	+0.2
3,102,203	-		CA265_RS12425	0.74	+0.4
3,102,277	-		CA265_RS12425	0.76	+0.3
3,102,277	-		CA265_RS12425	0.76	+0.5
3,102,297	+		CA265_RS12425	0.77	-0.3
3,102,297	+		CA265_RS12425	0.77	-0.3
3,102,390	+		CA265_RS12425	0.80	+0.3
3,102,390	+		CA265_RS12425	0.80	+0.4
3,102,418	+		CA265_RS12425	0.80	+0.6
3,102,419	-		CA265_RS12425	0.80	-0.2
3,102,459	+		CA265_RS12425	0.81	-0.1
3,102,460	-		CA265_RS12425	0.81	+0.3
3,102,472	+		CA265_RS12425	0.82	+0.3
3,102,527	-		CA265_RS12425	0.83	-0.5
3,102,580	+		CA265_RS12425	0.85	+0.3
3,102,581	-		CA265_RS12425	0.85	-0.0
3,102,662	-		CA265_RS12425	0.87	-0.0
3,102,787	-				-0.4
3,102,832	+				-0.6
3,102,865	-				-0.5
3,102,889	+				-0.8
3,102,901	-				+0.9
3,102,972	+				+0.2
3,102,973	-				+0.7
3,103,028	-				-0.1
3,103,102	-				+0.2
3,103,102	-				+0.4
3,103,106	-				+0.3
3,103,270	+				-0.4
3,103,271	-				-1.2
3,103,338	+				+0.2
3,103,390	-		CA265_RS12430	0.11	+0.3
3,103,422	+		CA265_RS12430	0.14	+0.2
3,103,423	-		CA265_RS12430	0.14	+0.3
3,103,423	-		CA265_RS12430	0.14	+0.5
3,103,423	-		CA265_RS12430	0.14	+0.1
3,103,426	+		CA265_RS12430	0.15	+0.9
3,103,426	+		CA265_RS12430	0.15	+0.4
3,103,469	+		CA265_RS12430	0.18	+0.5
3,103,594	+		CA265_RS12430	0.29	-1.4
3,103,667	-		CA265_RS12430	0.35	+1.2
3,103,678	+		CA265_RS12430	0.36	+0.2
3,103,701	+		CA265_RS12430	0.38	+0.6
3,103,737	-		CA265_RS12430	0.41	+0.1
3,103,797	+		CA265_RS12430	0.46	+0.1
3,103,879	-		CA265_RS12430	0.53	-0.6
3,103,881	+		CA265_RS12430	0.53	-0.0
3,104,046	+		CA265_RS12430	0.67	+0.5
3,104,049	+		CA265_RS12430	0.67	+0.2
3,104,049	+		CA265_RS12430	0.67	-0.2
3,104,050	-		CA265_RS12430	0.67	-0.6