Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24670 and BWI76_RS24675 are separated by 219 nucleotides BWI76_RS24675 and BWI76_RS24680 are separated by 74 nucleotides
BWI76_RS24670: BWI76_RS24670 - autoinducer-2 kinase, at 5,141,742 to 5,143,334
_RS24670
BWI76_RS24675: BWI76_RS24675 - NADPH-dependent 2,4-dienoyl-CoA reductase, at 5,143,554 to 5,145,575
_RS24675
BWI76_RS24680: BWI76_RS24680 - 23S rRNA (guanine(1835)-N(2))-methyltransferase, at 5,145,650 to 5,146,780
_RS24680
Position (kb)
5143
5144
5145
5146 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 5142.859 kb on - strand, within BWI76_RS24670 at 5142.885 kb on + strand, within BWI76_RS24670 at 5143.057 kb on + strand, within BWI76_RS24670 at 5143.121 kb on + strand, within BWI76_RS24670 at 5143.329 kb on + strand at 5143.329 kb on + strand at 5143.337 kb on - strand at 5143.337 kb on - strand at 5143.337 kb on - strand at 5143.337 kb on - strand at 5143.776 kb on + strand, within BWI76_RS24675 at 5143.784 kb on - strand, within BWI76_RS24675 at 5143.786 kb on - strand, within BWI76_RS24675 at 5143.836 kb on - strand, within BWI76_RS24675 at 5144.150 kb on + strand, within BWI76_RS24675 at 5144.158 kb on - strand, within BWI76_RS24675 at 5144.544 kb on + strand, within BWI76_RS24675 at 5144.566 kb on + strand, within BWI76_RS24675 at 5144.576 kb on + strand, within BWI76_RS24675 at 5144.579 kb on - strand, within BWI76_RS24675 at 5144.624 kb on - strand, within BWI76_RS24675 at 5144.725 kb on - strand, within BWI76_RS24675 at 5144.754 kb on - strand, within BWI76_RS24675 at 5144.762 kb on + strand, within BWI76_RS24675 at 5145.102 kb on - strand, within BWI76_RS24675 at 5145.104 kb on + strand, within BWI76_RS24675 at 5145.137 kb on + strand, within BWI76_RS24675 at 5145.137 kb on + strand, within BWI76_RS24675 at 5145.173 kb on - strand, within BWI76_RS24675 at 5145.226 kb on + strand, within BWI76_RS24675 at 5145.391 kb on + strand at 5145.484 kb on - strand at 5145.641 kb on + strand at 5145.656 kb on - strand at 5145.667 kb on + strand at 5145.675 kb on + strand at 5145.999 kb on + strand, within BWI76_RS24680 at 5146.026 kb on - strand, within BWI76_RS24680 at 5146.079 kb on + strand, within BWI76_RS24680 at 5146.148 kb on - strand, within BWI76_RS24680 at 5146.168 kb on - strand, within BWI76_RS24680 at 5146.186 kb on - strand, within BWI76_RS24680 at 5146.568 kb on - strand, within BWI76_RS24680 at 5146.573 kb on + strand, within BWI76_RS24680
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,142,859 - BWI76_RS24670 0.70 +0.7 5,142,885 + BWI76_RS24670 0.72 -0.5 5,143,057 + BWI76_RS24670 0.83 -0.1 5,143,121 + BWI76_RS24670 0.87 -0.1 5,143,329 + -1.1 5,143,329 + +0.9 5,143,337 - +0.5 5,143,337 - +1.0 5,143,337 - -0.7 5,143,337 - -0.3 5,143,776 + BWI76_RS24675 0.11 -0.8 5,143,784 - BWI76_RS24675 0.11 +0.7 5,143,786 - BWI76_RS24675 0.11 +0.0 5,143,836 - BWI76_RS24675 0.14 -0.5 5,144,150 + BWI76_RS24675 0.29 -0.4 5,144,158 - BWI76_RS24675 0.30 -0.5 5,144,544 + BWI76_RS24675 0.49 -1.0 5,144,566 + BWI76_RS24675 0.50 -0.5 5,144,576 + BWI76_RS24675 0.51 +1.0 5,144,579 - BWI76_RS24675 0.51 +0.1 5,144,624 - BWI76_RS24675 0.53 -0.7 5,144,725 - BWI76_RS24675 0.58 -0.6 5,144,754 - BWI76_RS24675 0.59 -1.3 5,144,762 + BWI76_RS24675 0.60 -1.2 5,145,102 - BWI76_RS24675 0.77 +0.0 5,145,104 + BWI76_RS24675 0.77 -1.9 5,145,137 + BWI76_RS24675 0.78 -0.4 5,145,137 + BWI76_RS24675 0.78 -1.7 5,145,173 - BWI76_RS24675 0.80 +0.4 5,145,226 + BWI76_RS24675 0.83 -2.0 5,145,391 + +0.2 5,145,484 - +0.9 5,145,641 + -0.9 5,145,656 - +5.6 5,145,667 + -2.6 5,145,675 + +0.9 5,145,999 + BWI76_RS24680 0.31 -1.5 5,146,026 - BWI76_RS24680 0.33 +1.4 5,146,079 + BWI76_RS24680 0.38 +0.2 5,146,148 - BWI76_RS24680 0.44 -0.1 5,146,168 - BWI76_RS24680 0.46 +0.4 5,146,186 - BWI76_RS24680 0.47 -0.2 5,146,568 - BWI76_RS24680 0.81 +0.6 5,146,573 + BWI76_RS24680 0.82 +0.7
Or see this region's nucleotide sequence