Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23440

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23435 and BWI76_RS23440 are separated by 231 nucleotidesBWI76_RS23440 and BWI76_RS23445 are separated by 244 nucleotides BWI76_RS23435: BWI76_RS23435 - oligogalacturonate lyase, at 4,889,468 to 4,890,643 _RS23435 BWI76_RS23440: BWI76_RS23440 - porin, at 4,890,875 to 4,891,570 _RS23440 BWI76_RS23445: BWI76_RS23445 - acetyl-CoA acetyltransferase, at 4,891,815 to 4,892,990 _RS23445 Position (kb) 4890 4891 4892Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6at 4889.882 kb on - strand, within BWI76_RS23435at 4890.157 kb on + strand, within BWI76_RS23435at 4890.213 kb on + strand, within BWI76_RS23435at 4890.223 kb on + strand, within BWI76_RS23435at 4890.223 kb on + strand, within BWI76_RS23435at 4890.376 kb on - strand, within BWI76_RS23435at 4890.414 kb on - strand, within BWI76_RS23435at 4890.428 kb on + strand, within BWI76_RS23435at 4890.487 kb on + strand, within BWI76_RS23435at 4890.495 kb on - strand, within BWI76_RS23435at 4890.525 kb on + strand, within BWI76_RS23435at 4890.623 kb on - strandat 4890.679 kb on + strandat 4890.761 kb on + strandat 4890.887 kb on + strandat 4890.887 kb on + strandat 4890.895 kb on - strandat 4890.895 kb on - strandat 4890.895 kb on - strandat 4890.895 kb on - strandat 4890.990 kb on + strand, within BWI76_RS23440at 4890.990 kb on + strand, within BWI76_RS23440at 4890.991 kb on + strand, within BWI76_RS23440at 4890.991 kb on + strand, within BWI76_RS23440at 4890.991 kb on + strand, within BWI76_RS23440at 4890.991 kb on + strand, within BWI76_RS23440at 4890.991 kb on + strandat 4890.991 kb on + strand, within BWI76_RS23440at 4890.998 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4890.999 kb on - strand, within BWI76_RS23440at 4891.006 kb on - strand, within BWI76_RS23440at 4891.018 kb on + strand, within BWI76_RS23440at 4891.033 kb on + strand, within BWI76_RS23440at 4891.033 kb on + strand, within BWI76_RS23440at 4891.050 kb on - strand, within BWI76_RS23440at 4891.050 kb on - strand, within BWI76_RS23440at 4891.065 kb on - strand, within BWI76_RS23440at 4891.075 kb on - strand, within BWI76_RS23440at 4891.090 kb on - strand, within BWI76_RS23440at 4891.119 kb on + strand, within BWI76_RS23440at 4891.192 kb on + strand, within BWI76_RS23440at 4891.201 kb on - strand, within BWI76_RS23440at 4891.204 kb on + strand, within BWI76_RS23440at 4891.222 kb on - strand, within BWI76_RS23440at 4891.241 kb on - strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.292 kb on + strand, within BWI76_RS23440at 4891.300 kb on - strand, within BWI76_RS23440at 4891.300 kb on - strand, within BWI76_RS23440at 4891.300 kb on - strand, within BWI76_RS23440at 4891.300 kb on - strand, within BWI76_RS23440at 4891.303 kb on + strand, within BWI76_RS23440at 4891.315 kb on + strand, within BWI76_RS23440at 4891.323 kb on - strandat 4891.323 kb on - strand, within BWI76_RS23440at 4891.325 kb on - strand, within BWI76_RS23440at 4891.327 kb on + strand, within BWI76_RS23440at 4891.335 kb on - strand, within BWI76_RS23440at 4891.335 kb on - strand, within BWI76_RS23440at 4891.340 kb on + strand, within BWI76_RS23440at 4891.373 kb on + strand, within BWI76_RS23440at 4891.383 kb on + strand, within BWI76_RS23440at 4891.408 kb on + strand, within BWI76_RS23440at 4891.416 kb on - strand, within BWI76_RS23440at 4891.416 kb on - strand, within BWI76_RS23440at 4891.434 kb on - strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.452 kb on + strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.460 kb on - strand, within BWI76_RS23440at 4891.465 kb on - strand, within BWI76_RS23440at 4891.470 kb on - strand, within BWI76_RS23440at 4891.538 kb on + strandat 4891.538 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.540 kb on + strandat 4891.546 kb on - strandat 4891.546 kb on - strandat 4891.546 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.548 kb on - strandat 4891.549 kb on + strandat 4891.549 kb on + strandat 4891.549 kb on + strandat 4891.549 kb on + strandat 4891.549 kb on + strandat 4891.549 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.550 kb on + strandat 4891.557 kb on - strandat 4891.557 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.558 kb on - strandat 4891.571 kb on + strandat 4891.686 kb on + strandat 4891.706 kb on + strandat 4891.708 kb on + strandat 4891.741 kb on + strandat 4891.750 kb on - strandat 4891.795 kb on - strandat 4891.802 kb on - strandat 4891.808 kb on + strandat 4891.832 kb on + strandat 4891.844 kb on + strandat 4891.852 kb on + strandat 4891.852 kb on + strandat 4891.860 kb on - strandat 4891.866 kb on + strandat 4891.874 kb on - strandat 4891.874 kb on - strandat 4891.907 kb on - strandat 4891.923 kb on - strandat 4891.955 kb on + strand, within BWI76_RS23445at 4891.969 kb on + strand, within BWI76_RS23445at 4892.054 kb on - strand, within BWI76_RS23445at 4892.095 kb on - strand, within BWI76_RS23445at 4892.557 kb on - strand, within BWI76_RS23445

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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4,889,882 - BWI76_RS23435 0.35 -0.2
4,890,157 + BWI76_RS23435 0.59 +0.2
4,890,213 + BWI76_RS23435 0.63 +1.9
4,890,223 + BWI76_RS23435 0.64 -0.7
4,890,223 + BWI76_RS23435 0.64 -0.0
4,890,376 - BWI76_RS23435 0.77 -1.1
4,890,414 - BWI76_RS23435 0.80 -1.3
4,890,428 + BWI76_RS23435 0.82 -0.7
4,890,487 + BWI76_RS23435 0.87 +0.7
4,890,495 - BWI76_RS23435 0.87 -0.7
4,890,525 + BWI76_RS23435 0.90 +0.1
4,890,623 - -0.7
4,890,679 + +0.5
4,890,761 + -0.9
4,890,887 + -1.0
4,890,887 + -0.2
4,890,895 - +1.6
4,890,895 - -0.3
4,890,895 - -0.4
4,890,895 - +0.1
4,890,990 + BWI76_RS23440 0.17 +0.5
4,890,990 + BWI76_RS23440 0.17 -1.4
4,890,991 + BWI76_RS23440 0.17 +0.7
4,890,991 + BWI76_RS23440 0.17 -0.7
4,890,991 + BWI76_RS23440 0.17 +2.9
4,890,991 + BWI76_RS23440 0.17 +0.0
4,890,991 + +1.7
4,890,991 + BWI76_RS23440 0.17 +0.1
4,890,998 - BWI76_RS23440 0.18 -0.5
4,890,999 - BWI76_RS23440 0.18 +6.2
4,890,999 - BWI76_RS23440 0.18 -0.6
4,890,999 - BWI76_RS23440 0.18 -1.6
4,890,999 - BWI76_RS23440 0.18 -0.0
4,890,999 - BWI76_RS23440 0.18 +0.8
4,890,999 - BWI76_RS23440 0.18 -1.0
4,890,999 - BWI76_RS23440 0.18 +1.0
4,890,999 - BWI76_RS23440 0.18 +1.3
4,891,006 - BWI76_RS23440 0.19 +0.3
4,891,018 + BWI76_RS23440 0.21 -0.1
4,891,033 + BWI76_RS23440 0.23 +1.2
4,891,033 + BWI76_RS23440 0.23 -1.7
4,891,050 - BWI76_RS23440 0.25 +0.3
4,891,050 - BWI76_RS23440 0.25 -0.3
4,891,065 - BWI76_RS23440 0.27 +0.1
4,891,075 - BWI76_RS23440 0.29 +0.1
4,891,090 - BWI76_RS23440 0.31 -0.7
4,891,119 + BWI76_RS23440 0.35 +0.5
4,891,192 + BWI76_RS23440 0.46 +2.4
4,891,201 - BWI76_RS23440 0.47 -0.7
4,891,204 + BWI76_RS23440 0.47 -0.8
4,891,222 - BWI76_RS23440 0.50 +0.1
4,891,241 - BWI76_RS23440 0.53 +0.7
4,891,292 + BWI76_RS23440 0.60 -0.1
4,891,292 + BWI76_RS23440 0.60 -0.3
4,891,292 + BWI76_RS23440 0.60 +2.1
4,891,292 + BWI76_RS23440 0.60 -1.6
4,891,292 + BWI76_RS23440 0.60 +0.5
4,891,292 + BWI76_RS23440 0.60 +0.8
4,891,292 + BWI76_RS23440 0.60 +0.2
4,891,300 - BWI76_RS23440 0.61 +0.1
4,891,300 - BWI76_RS23440 0.61 -1.1
4,891,300 - BWI76_RS23440 0.61 +0.1
4,891,300 - BWI76_RS23440 0.61 -0.8
4,891,303 + BWI76_RS23440 0.61 +1.9
4,891,315 + BWI76_RS23440 0.63 +1.0
4,891,323 - +1.9
4,891,323 - BWI76_RS23440 0.64 -0.1
4,891,325 - BWI76_RS23440 0.65 +0.6
4,891,327 + BWI76_RS23440 0.65 -0.2
4,891,335 - BWI76_RS23440 0.66 +0.1
4,891,335 - BWI76_RS23440 0.66 -0.2
4,891,340 + BWI76_RS23440 0.67 +2.0
4,891,373 + BWI76_RS23440 0.72 -0.4
4,891,383 + BWI76_RS23440 0.73 -0.4
4,891,408 + BWI76_RS23440 0.77 +0.2
4,891,416 - BWI76_RS23440 0.78 -0.1
4,891,416 - BWI76_RS23440 0.78 +3.6
4,891,434 - BWI76_RS23440 0.80 -0.2
4,891,452 + BWI76_RS23440 0.83 -0.5
4,891,452 + BWI76_RS23440 0.83 +0.1
4,891,452 + BWI76_RS23440 0.83 +0.7
4,891,452 + BWI76_RS23440 0.83 -0.6
4,891,452 + BWI76_RS23440 0.83 -1.6
4,891,452 + BWI76_RS23440 0.83 +1.0
4,891,452 + BWI76_RS23440 0.83 -1.0
4,891,460 - BWI76_RS23440 0.84 -0.9
4,891,460 - BWI76_RS23440 0.84 +0.7
4,891,460 - BWI76_RS23440 0.84 +0.3
4,891,460 - BWI76_RS23440 0.84 +0.7
4,891,460 - BWI76_RS23440 0.84 -0.8
4,891,460 - BWI76_RS23440 0.84 -0.2
4,891,460 - BWI76_RS23440 0.84 +0.1
4,891,460 - BWI76_RS23440 0.84 +0.1
4,891,460 - BWI76_RS23440 0.84 +1.2
4,891,465 - BWI76_RS23440 0.85 +1.5
4,891,470 - BWI76_RS23440 0.85 +0.3
4,891,538 + -0.1
4,891,538 + +0.6
4,891,540 + +1.6
4,891,540 + +1.3
4,891,540 + -1.0
4,891,540 + -1.4
4,891,540 + -1.0
4,891,540 + -0.8
4,891,540 + -0.0
4,891,540 + +0.0
4,891,540 + +2.3
4,891,540 + +0.2
4,891,540 + -0.6
4,891,540 + +0.3
4,891,540 + +0.3
4,891,540 + +0.4
4,891,540 + -1.4
4,891,540 + -0.1
4,891,540 + -0.7
4,891,540 + -0.4
4,891,546 - -0.9
4,891,546 - -0.2
4,891,546 - +0.3
4,891,548 - -1.4
4,891,548 - -1.7
4,891,548 - -0.6
4,891,548 - -0.5
4,891,548 - +0.0
4,891,548 - +0.1
4,891,548 - +1.9
4,891,548 - +4.7
4,891,548 - -0.1
4,891,548 - -0.5
4,891,548 - -0.1
4,891,548 - +0.9
4,891,548 - -0.3
4,891,548 - +0.1
4,891,548 - -0.5
4,891,548 - +2.2
4,891,548 - +0.5
4,891,548 - -0.8
4,891,549 + +0.3
4,891,549 + +0.2
4,891,549 + +0.9
4,891,549 + -1.0
4,891,549 + +1.5
4,891,549 + +2.3
4,891,550 + +1.2
4,891,550 + +0.1
4,891,550 + +0.4
4,891,550 + -0.7
4,891,550 + +1.1
4,891,550 + +0.6
4,891,550 + -0.2
4,891,550 + +1.0
4,891,550 + +1.7
4,891,557 - -0.3
4,891,557 - +0.5
4,891,558 - +1.1
4,891,558 - +2.5
4,891,558 - +0.7
4,891,558 - +3.2
4,891,558 - +1.0
4,891,558 - +0.3
4,891,558 - -0.0
4,891,558 - +2.5
4,891,558 - +2.9
4,891,558 - +0.3
4,891,571 + -0.4
4,891,686 + +0.9
4,891,706 + +0.6
4,891,708 + -0.6
4,891,741 + +0.2
4,891,750 - +1.3
4,891,795 - +0.2
4,891,802 - +1.6
4,891,808 + +0.3
4,891,832 + +0.8
4,891,844 + +2.3
4,891,852 + +0.4
4,891,852 + -0.3
4,891,860 - -0.0
4,891,866 + +1.2
4,891,874 - -0.4
4,891,874 - +0.7
4,891,907 - -0.4
4,891,923 - +0.9
4,891,955 + BWI76_RS23445 0.12 +0.4
4,891,969 + BWI76_RS23445 0.13 +0.5
4,892,054 - BWI76_RS23445 0.20 +0.2
4,892,095 - BWI76_RS23445 0.24 -0.1
4,892,557 - BWI76_RS23445 0.63 +0.2

Or see this region's nucleotide sequence