Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS23350

Experiment: Gly-Glu (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS23345 and BWI76_RS23350 are separated by 7 nucleotidesBWI76_RS23350 and BWI76_RS23355 are separated by 295 nucleotides BWI76_RS23345: BWI76_RS23345 - glycoside hydrolase, at 4,867,135 to 4,868,562 _RS23345 BWI76_RS23350: BWI76_RS23350 - PTS system lactose/cellobiose family transporter subunit IIC, at 4,868,570 to 4,869,907 _RS23350 BWI76_RS23355: BWI76_RS23355 - LacI family transcriptional regulator, at 4,870,203 to 4,871,213 _RS23355 Position (kb) 4868 4869 4870Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4867.718 kb on + strand, within BWI76_RS23345at 4868.058 kb on + strand, within BWI76_RS23345at 4868.198 kb on - strand, within BWI76_RS23345at 4868.198 kb on - strand, within BWI76_RS23345at 4868.252 kb on - strand, within BWI76_RS23345at 4868.511 kb on + strandat 4868.906 kb on + strand, within BWI76_RS23350at 4868.914 kb on - strand, within BWI76_RS23350at 4868.966 kb on + strand, within BWI76_RS23350at 4869.070 kb on + strand, within BWI76_RS23350at 4869.078 kb on - strand, within BWI76_RS23350at 4869.126 kb on + strand, within BWI76_RS23350at 4869.167 kb on - strandat 4869.206 kb on + strand, within BWI76_RS23350at 4869.242 kb on + strand, within BWI76_RS23350at 4869.250 kb on - strand, within BWI76_RS23350at 4869.262 kb on + strand, within BWI76_RS23350at 4869.564 kb on - strand, within BWI76_RS23350at 4869.686 kb on + strand, within BWI76_RS23350at 4869.694 kb on - strand, within BWI76_RS23350at 4869.729 kb on - strand, within BWI76_RS23350at 4869.840 kb on - strandat 4870.024 kb on + strandat 4870.513 kb on + strand, within BWI76_RS23355at 4870.532 kb on - strand, within BWI76_RS23355at 4870.705 kb on - strand, within BWI76_RS23355at 4870.730 kb on - strand, within BWI76_RS23355at 4870.884 kb on - strand, within BWI76_RS23355

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-Glu (C)
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4,867,718 + BWI76_RS23345 0.41 -0.1
4,868,058 + BWI76_RS23345 0.65 -0.1
4,868,198 - BWI76_RS23345 0.74 +0.7
4,868,198 - BWI76_RS23345 0.74 -0.2
4,868,252 - BWI76_RS23345 0.78 -0.1
4,868,511 + +1.6
4,868,906 + BWI76_RS23350 0.25 -0.6
4,868,914 - BWI76_RS23350 0.26 -0.3
4,868,966 + BWI76_RS23350 0.30 +1.9
4,869,070 + BWI76_RS23350 0.37 +1.0
4,869,078 - BWI76_RS23350 0.38 +1.6
4,869,126 + BWI76_RS23350 0.42 -1.7
4,869,167 - +2.9
4,869,206 + BWI76_RS23350 0.48 -1.2
4,869,242 + BWI76_RS23350 0.50 +0.5
4,869,250 - BWI76_RS23350 0.51 -0.3
4,869,262 + BWI76_RS23350 0.52 +2.9
4,869,564 - BWI76_RS23350 0.74 +1.2
4,869,686 + BWI76_RS23350 0.83 +1.0
4,869,694 - BWI76_RS23350 0.84 -0.7
4,869,729 - BWI76_RS23350 0.87 -1.1
4,869,840 - +0.1
4,870,024 + +0.6
4,870,513 + BWI76_RS23355 0.31 +2.9
4,870,532 - BWI76_RS23355 0.33 -1.1
4,870,705 - BWI76_RS23355 0.50 -1.3
4,870,730 - BWI76_RS23355 0.52 -1.9
4,870,884 - BWI76_RS23355 0.67 -0.8

Or see this region's nucleotide sequence