Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22290 and BWI76_RS22295 are separated by 26 nucleotides BWI76_RS22295 and BWI76_RS22300 are separated by 212 nucleotides BWI76_RS22300 and BWI76_RS22305 overlap by 8 nucleotides
BWI76_RS22290: BWI76_RS22290 - PTS cellobiose/arbutin/salicin transporter subunit IIBC, at 4,646,841 to 4,648,283
_RS22290
BWI76_RS22295: BWI76_RS22295 - 6-phospho-beta-glucosidase, at 4,648,310 to 4,649,734
_RS22295
BWI76_RS22300: BWI76_RS22300 - hydrogenase 3 maturation endopeptidase HyCI, at 4,649,947 to 4,650,432
_RS22300
BWI76_RS22305: BWI76_RS22305 - formate hydrogenlyase maturation protein HycH, at 4,650,425 to 4,650,835
_RS22305
Position (kb)
4648
4649
4650 Strain fitness (log2 ratio)
-2
-1
0
1 at 4647.443 kb on + strand, within BWI76_RS22290 at 4647.506 kb on - strand, within BWI76_RS22290 at 4647.515 kb on + strand, within BWI76_RS22290 at 4647.688 kb on + strand, within BWI76_RS22290 at 4647.691 kb on - strand, within BWI76_RS22290 at 4647.691 kb on - strand, within BWI76_RS22290 at 4647.691 kb on - strand, within BWI76_RS22290 at 4648.094 kb on + strand, within BWI76_RS22290 at 4648.139 kb on + strand at 4648.212 kb on - strand at 4648.212 kb on - strand at 4648.301 kb on + strand at 4648.586 kb on - strand, within BWI76_RS22295 at 4648.819 kb on - strand, within BWI76_RS22295 at 4648.833 kb on + strand, within BWI76_RS22295 at 4649.018 kb on - strand, within BWI76_RS22295 at 4649.040 kb on - strand, within BWI76_RS22295 at 4649.119 kb on - strand, within BWI76_RS22295 at 4649.173 kb on - strand, within BWI76_RS22295 at 4649.251 kb on - strand, within BWI76_RS22295 at 4649.368 kb on + strand, within BWI76_RS22295 at 4649.552 kb on + strand, within BWI76_RS22295 at 4649.559 kb on - strand, within BWI76_RS22295 at 4649.614 kb on + strand at 4649.774 kb on - strand at 4649.995 kb on + strand at 4650.366 kb on - strand, within BWI76_RS22300 at 4650.494 kb on - strand, within BWI76_RS22305
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 4,647,443 + BWI76_RS22290 0.42 -0.9 4,647,506 - BWI76_RS22290 0.46 -0.9 4,647,515 + BWI76_RS22290 0.47 -0.3 4,647,688 + BWI76_RS22290 0.59 +0.1 4,647,691 - BWI76_RS22290 0.59 -0.4 4,647,691 - BWI76_RS22290 0.59 -0.1 4,647,691 - BWI76_RS22290 0.59 -0.1 4,648,094 + BWI76_RS22290 0.87 -0.3 4,648,139 + -1.1 4,648,212 - +0.7 4,648,212 - +0.3 4,648,301 + +0.0 4,648,586 - BWI76_RS22295 0.19 -0.8 4,648,819 - BWI76_RS22295 0.36 +0.3 4,648,833 + BWI76_RS22295 0.37 -0.8 4,649,018 - BWI76_RS22295 0.50 +0.3 4,649,040 - BWI76_RS22295 0.51 -1.0 4,649,119 - BWI76_RS22295 0.57 -0.4 4,649,173 - BWI76_RS22295 0.61 -0.7 4,649,251 - BWI76_RS22295 0.66 -0.6 4,649,368 + BWI76_RS22295 0.74 -1.9 4,649,552 + BWI76_RS22295 0.87 +0.8 4,649,559 - BWI76_RS22295 0.88 -2.2 4,649,614 + +0.9 4,649,774 - -0.3 4,649,995 + -0.3 4,650,366 - BWI76_RS22300 0.86 -0.5 4,650,494 - BWI76_RS22305 0.17 +0.9
Or see this region's nucleotide sequence